YALI0E13508g

Overview

Description similar to uniprot|P25294 Saccharomyces cerevisiae YNL007c SIS1 heat shock protein
Locus type CDS
Locus tag YALI0E13508g

Location

Species Yarrowia lipolytica Positions 1633126..1634307
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1182 (nuc.)
Previous locus YALI0E13486g Next locus YALI0E13530g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E13508g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E13508gYALI0E13508g_mRNA-001YALI0E13508g_CDS-001

Nucleotide sequence

 

>YALI0E13508g
ATGGTGAAAGAAACAAAGCTCTACGACGACCTCGGGGTGTCTTCTGGCGCCAGCGAGGCG
GACATCAAAAAGGCGTACCGAAAGGCTGCTCTCAAGTACCATCCTGACAAGCCCGGAGGA
AATGAGGAGAAGTTCAAGCAGATTTCCGAGGCGTACGACATTCTGTCAGACAAGGAGAAG
CGAGAGCTCTACGACCAGTATGGTTTAGAGGCTGCTCGAAAAGGAGGAGTTCCCATGCCC
GAACCCGGCCAAGGAGGCGGGTTTCCGGGCGGAGGCGGGTTTCCCGGCGGCGCCGGAGGT
TTCCCCGGAGGTGGCTTCTCTAGTGGAGGAGGCGGTGGTGGCCCTCAGACTTTCCACTTC
TCTTCTGGTGGCGGTGGTCCGGGTGGCTTCGGTGGTTTCTCGTCTGGCGACGCCTTCAAC
ATCTTCAACTCATTCGGACAGCAGGGCGGATTCGACGACGAGGGAGACGACTACGGAGGA
TTCGCCAACCTCTTTGGCGGACGTGCTGGCCGCCGTGCAGGAGGCATGGGTGGCGGCATG
GGCGGTATGGGAGGCATGCCGCGCCAGAGGGCCCGATCGCCCGAGCGAACACAGGTGACA
GTCAAGATGCCCGTGTCTTTGGAGGACCTGTGCACCGGTGCCACCAAGAAAATGAAGATC
ACCCGAAAGGGCCCCAGTGGCCAGCCCGAAGAGAAGGTGCTGACCGTCAACATCAAGCCC
GGCTGGAAGGCAGGCACCAAGCTCACCTTTGCTGGCGAGGGAGACTCTCAGCCCAACGGT
GGCCAGCAGGATGTGGTGTTTGTCATTGAGCAGAAGCCCAACCCCGTGTTTACTCGAGAC
GGTGATGATCTCAAAATGTCCATCAAGCTGTCTCTCAAGGAGGCTCTGTGTGGATTCACC
AAGATCATTGAGACCCTGGAGGGCAAGAAGCTCAAGATTGAGCAGCGTCTGCCCATCAAC
CCCGGCCACATTATCACCTACCCCAACTATGGTATGCCCATTTCCAAGAAGCCTGGTGAG
CGTGGTCAGTTGATCATCACCATCAAGGTGGACTTCCCCAGCTCGTTGACCGACGCCCAG
CGAAAGGCCATTGAGGACAACTTTTAATAGACTAACTTATTGTACATAGAGTGCAAGAGC
ATTCACATGTAAGAATTAATAAATGATAGCATGATCATGGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E13508g_CDS-001

Protein length: 369 aa.
Product: Type II HSP40 co-chaperone that interacts with the HSP70 protein Ssa1p, putative

>YALI0E13508g_CDS-001 MVKETKLYDDLGVSSGASEADIKKAYRKAALKYHPDKPGGNEEKFKQISEAYDILSDKEK
RELYDQYGLEAARKGGVPMPEPGQGGGFPGGGGFPGGAGGFPGGGFSSGGGGGGPQTFHF
SSGGGGPGGFGGFSSGDAFNIFNSFGQQGGFDDEGDDYGGFANLFGGRAGRRAGGMGGGM
GGMGGMPRQRARSPERTQVTVKMPVSLEDLCTGATKKMKITRKGPSGQPEEKVLTVNIKP
GWKAGTKLTFAGEGDSQPNGGQQDVVFVIEQKPNPVFTRDGDDLKMSIKLSLKEALCGFT
KIIETLEGKKLKIEQRLPINPGHIITYPNYGMPISKKPGERGQLIITIKVDFPSSLTDAQ
RKAIEDNF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG