YALI0E13486g

Overview

Description highly similar to uniprot|O13473 Kluyveromyces lactis CBF5 Centromere/microtubule binding protein
Locus type CDS
Locus tag YALI0E13486g

Location

Species Yarrowia lipolytica Positions 1630108..1631601
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1494 (nuc.)
Previous locus YALI0E13464g Next locus YALI0E13508g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E13486g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E13486gYALI0E13486g_mRNA-001YALI0E13486g_CDS-001

Nucleotide sequence

 

>YALI0E13486g
ATGTCTGCTGTTGTTCAGGAACAAACCGACTATCTCATCAAGCCCGAGAATGTTGGCCCC
TCGGCCGACACCTCTGAGTGGCCCCTTTTGCTCAAGAACTACGACAAGCTGCTTGTGCGG
TCCGGTCACTACACCCCCATCCCCACCGGATGTTCTCCTCTGAAGCGAGACCTCAAGTCG
TACATTGCTTCCGGTGTCATCAACCTCGACAAGCCCTCCAACCCCTCTTCCCATGAGGTT
GTTGCCTGGATCAAGCGAATCCTGCGATGCGAGAAGACCGGTCACTCTGGTACTCTGGAT
CCCAAGGTTACTGGATGTCTGATTGTGTGCATCGACCGAGCCACCCGTCTGGTCAAGTCC
CAGCAGGGAGCCGGAAAGGAGTACGTGTGTATCGTGCGACTCCACGATGCTCTGGAGGAC
GAGAAGGAGATGGCCCGTGGCCTCGAGAACCTCACTGGAGCCCTGTTCCAGCGACCTCCT
CTCATTTCCGCCGTCAAGCGACAGCTGCGAGTCCGAACCATCTACGACTCCAAGCTGCTT
GAGTTTGACAACGACCGACACCTCGGTGTCTTCTGGGCCTCCTGTGAGGCCGGTACCTAC
ATGCGAACCCTGTGTGTGCATCTGGGTATGCTGCTCGGTGTTGGAGGCCACATGCAGGAG
CTGCGACGAGTGCGATCCGGTGCTCTCGACGAGTCCGACGGAATGGTCACCTTGCACGAC
ATTCTCGATGCCCAGTGGCTCTACGACAACACCAAGGACGAGTCGTACCTGCGACGATGC
ATCCGACCCCTTGAGTCTCTGCTGCTCGGCTACAAGCGAATTGTAGTCAAGGACTCCGCC
GTCAACTCCATCTGTTACGGCGCCAAGCTCATGCTTCCCGGTGTTCTCCGATACGAGGAG
GGCATTGAGCTGGAGGACGAGATTGTGCTCATCACCACCAAGGGTGAGGCCATTGCTCTT
GGTATTGCCCAGATGACCACCGTCGACCTTGCTTCCTGCGACCACGGTGTCGTGTCTCGA
ATCAAGCGATGCATCATGGAGCGAGACACCTACCCCCGACGATGGGGATTGGGACCCGTT
GCTACCGAGAAGAAGAAGCTCAAGGCCGACGGTAAGCTCGACAAGTACGGTCGACCCAAC
GAGAGCACTCCTGCCGATTGGAAGAAGAGCTACGTGGACCACACTGAGGACGAGCCCGTC
ACCAAGCCCGTTGTCGCTTCTGTGACCGAGACCATTGCTGTCGAGGCCCCCAAGAAGGAG
GTCGAGGCTGATGTCTCCATGGCCGCCGACTCTGACGATGAGGAGGAGGACAAGAAGGAG
AAGAAGAAGGAAAAGAAGGACAAGAAGGACAAGAAGGAAAAGAAGGAAAAGAAGGAGAAG
AAGGAGAAGAAGCGAAAGGCCGAGGACTCCGACGACGAGGGCGAGAAGAAGAAGAAGAAG
AAGAAGAGCAAGGATTAGTGTCTGCATGTAAATTATGTTATTATTTGGTTCCGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E13486g_CDS-001

Protein length: 486 aa.
Product: Centromere/microtubule binding protein, putative

>YALI0E13486g_CDS-001 MSAVVQEQTDYLIKPENVGPSADTSEWPLLLKNYDKLLVRSGHYTPIPTGCSPLKRDLKS
YIASGVINLDKPSNPSSHEVVAWIKRILRCEKTGHSGTLDPKVTGCLIVCIDRATRLVKS
QQGAGKEYVCIVRLHDALEDEKEMARGLENLTGALFQRPPLISAVKRQLRVRTIYDSKLL
EFDNDRHLGVFWASCEAGTYMRTLCVHLGMLLGVGGHMQELRRVRSGALDESDGMVTLHD
ILDAQWLYDNTKDESYLRRCIRPLESLLLGYKRIVVKDSAVNSICYGAKLMLPGVLRYEE
GIELEDEIVLITTKGEAIALGIAQMTTVDLASCDHGVVSRIKRCIMERDTYPRRWGLGPV
ATEKKKLKADGKLDKYGRPNESTPADWKKSYVDHTEDEPVTKPVVASVTETIAVEAPKKE
VEADVSMAADSDDEEEDKKEKKKEKKDKKDKKEKKEKKEKKEKKRKAEDSDDEGEKKKKK
KKSKD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG