YALI0E13277g - YEF3

Overview

Description uniprot|Q6C617 Yarrowia lipolytica YALI0E13277g YEF3 Elongation factor 3 (EF-3)
Locus type CDS
Gene name YEF3
Locus tag YALI0E13277g

Location

Species Yarrowia lipolytica Positions 1601120..1604347
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 3228 (nuc.)
Previous locus YALI0E13255g Next locus YALI0E13299g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E13277g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E13277gYALI0E13277g_mRNA-001YALI0E13277g_CDS-001

Nucleotide sequence

 

>YALI0E13277g
ATGAGTGCTCAGAAGGAAGCCGCCATTACGCACAAGACGCTCTCTGAGCTCTTTGAGAAG
CTCTCTGTCAGCGACTCTCTGGAGTCTCGACTTGAGGCTGCCAACAACGTTGCCACCTTT
GTTAACCAGGGCGACGTGATTGAGCACGATGTTCCTAACCAGCTGCTGGCTGCCACCAAG
GCCAAGCTGAACCAGAAGAAGGACCAGGCTGCCGTTCTCAACGCTCTGCAGCTGCTCAAC
TCTCTTGCCACCTCCTCCTCCGTTGCCCCCAACGTGGAGCCCTACCTTGTTGAGGCCATC
ACTGATGTGCTCGCCAAGGTCGGTGACAAGGACAAGCAGATCCAGGACGCCGCCGCCAAG
ACCGCCAAGGATATTGCTCAGTGCATCACTCCTCGATCCGTCAAGTTCATTCTGCCCCTG
ATCATCGAGTCTCTTGTTAACACCAACAAGTGGCCCGAGAAGGTTGCTGCTCTCGAGTGC
ATTTCCATCCTGGTCACCGTTGCCCGAGACCAGGTTGCCCTGCGAATGCCCGAGCTCATC
CCCGTCCTCTCCGAGGCCATGTGGGACACCAAGAAGGAGGTCAAGGAGCAGGCCACCGCC
ACCATCACCAAGTCCACCGACACCATTGACAACAAGGATATCATCAAGTTCATCCCCGCC
CTGATTGCCTGTATCTCCAAGCCCACCGAGGTCCCCGAGACTGTGCACATTCTCGGTGCC
ACCACCTTTGTGTCCGAGGTCACCACCGCCACCCTCTCCATCATGGCTCCTCTGCTGTCC
CGAGGTCTTGCTGAGCGAGACACCGCCATCAAGCGAAAGGCCGCCGTCATTGTCGATAAC
ATGTGTAAGCTGGTCGACGACCCCCAGGTTGTTGCTCCCTTCCTTGAGACCCTTTACCCC
GCTCTCAAGACTAACTACGCCAACATTGCCGACCCCGAGGCTCGAGACGTTACTCTGCGA
GCTCTCAACACCCTGAAGCGAGTTGGTGAGATTGTTGACGACAAGATCCCCGAGGTTTCC
ACCGCCGGTGACACCAAGGTCAACCTTGCCATCCTCGAGAAGCTGCTCGAGCCCTTCAAG
GTCGACACCAAGAAGTTCGGCCTCATGATGCAGTTCATTGCCTCCATCTCCGGTGACCTC
ATTGACGAGCGTCTCACCCACGAGGCCGACTGGGCCGAGTCTCTGGTTGCCTTCATGGTT
ACCATTCTCCCCGAGAAGGATGCTCGAACCGTCATTGAGTCTCTCCGAAAGCAGGCCATC
GCCAACATCCCCGGTGCCACCAACTTTGAGGAGGAGGACGACGAGGGCGAGGATCTGTGT
AACTGTGAGTTCTCTCTGGCTTACGGTGCTAAGATTCTGCTGAACCGAACCCAGCTGCGA
CTCAAGCGAGGCCGACGATACGGTCTCTGTGGTCCTAACGGTGCTGGTAAGTCCACCCTG
ATGCGAGCCATTGCCAACGGTCAGGTCGAGGGTTTCCCCACCCAGGAGGAGTGTCGAACT
GTCTTCGTCGACCACGACATTGACGGTACCCACGCCGACACCAACGTTGTCGACTACGTC
CGAAAGACCGCCGGTGAGTCCATCGGTACTGAGGAGGAGGTCCGAAAGCAGCTGCTTGAC
TTCCTGTTCACTGACGAGATGACCCGAATGCCCATCACCTCTCTGTCTGGTGGATGGAAG
ATGAAGCTGGCTCTTGCCACTGCCGTCCTCCGAAAGGCCGATATCCTGCTGCTTGATGAG
CCTACCAACCATCTGGATACCGTCAACGTTGCTTGGCTGGTCAACTACCTTAACACCTGT
GGTATCACCTCCATCATCGTCTCCCACGACTCTGGTTTCCTCGATAACGTCTGTGAGTAC
ATCATTCACTACGAGCGATTCAAGCTCCGAAAGTACAAGGGTAACCTGTCCGAGTTTGTC
AAGAAGGTTCCTTCCGCCAAGTCTTACTACGAGCTTGGAGCCTCCGAGATTAACTTCTCT
TTCCCCGAGCCCGGTTTCCTCGAGGGTGTCAAGACCAAGCAGAAGGCTATTGTCAAGGTC
CAGAACATGACCTTCCAGTACCCCGGTACCACCAAGCCCCAGATCCGAAACGTCTCTTTC
CAGTGCTCTCTGTCTTCTCGAATTGCCGTTATCGGTCCCAACGGTGCTGGTAAGTCCACT
CTTATCAACGTCCTGACCGGTGAGCTGCTCCCCACCTCCGGTGAGGTTTACGCCCACGAG
AACTGTCGAATTGCTTACATCAAGCAGCACGCCTTTGCCCATATCGACTCCCATCTTGAC
TCCACCCCCTCTGAGTACATCCAGTGGCGATTCCAGACCGGTGAGGATCGAGAGACCATG
GACCGAGCCAACCGACAGATCACCGACTCCGATGAGGCTGCCATGAACAAGATCTACAAG
ATCGAGGGCACCCCCCGACGAGTTGCTGGTGTTCACGCCCGACGAAAGTTCAAGAACTCT
TACGAGTACGAGTGTTCTTTCCTGCTCGGTGAGAACCTTGGCATGAAGTCCGAGAAGTGG
ATCCCCATGGGTTCCGTCGACAACGCCTGGATCCCCCGATCCGAGCTCATGGAGTCCCAC
TCCAAGCTGGTTGCTGAGGTTGATATGAAGGAGGCCCTTGCTTCCGGACAGTTCCGACCT
CTTACCAAGAAGGAGATTGAGGCCCACTGCGCCCTCCTTGGTCTCGAGCCCGAGCTTGTC
TCTCACTCTCGAATCCGAGGTCTGTCTGGTGGTCAGAAGGTCAAGCTTGTGCTTGCCGCC
TGTACCTGGCAGCGACCCCATCTTATCGTCCTTGATGAGCCTACCAACTATCTGGATCGA
GACTCTCTTGGAGCTCTGTCTCGAGCTATCAAGCGATTCGAGGGTGGTGTTGTCATCATT
ACCCATTCCGCCGAGTTCACCAAGGATCTTACCGAGGAGGTCTGGGCCGTTATGGATGGT
GTCATGACTCCTTCCGGCCACAACTGGGTCTCTGGTCAGGGATCTGGTCCCCGACTTGGA
AAGAAGGAGGGTGACGAGGAGGAGAAGTTCGACGCCATGGGCAACAAGATTGTGTCCGAG
AAGAAGAAGGCCAAGCTTTCCGCTGCCGAGCTCCGAAAGAAGAAGAAGGAGCGAATGAAG
CGAAAGAAGGAGCAGGGTGATGCTTACGTCTCTTCCGATGACGACTTCTAAAATCAAAAT
TAGTAGCCAATAGATTATGCGAAGAAAAATTGATATTTGTAATTACCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E13277g_CDS-001

Protein length: 1057 aa.
Product: Elongation factor 3 (EF-3)
Gene: YEF3

>YALI0E13277g_CDS-001 MSAQKEAAITHKTLSELFEKLSVSDSLESRLEAANNVATFVNQGDVIEHDVPNQLLAATK
AKLNQKKDQAAVLNALQLLNSLATSSSVAPNVEPYLVEAITDVLAKVGDKDKQIQDAAAK
TAKDIAQCITPRSVKFILPLIIESLVNTNKWPEKVAALECISILVTVARDQVALRMPELI
PVLSEAMWDTKKEVKEQATATITKSTDTIDNKDIIKFIPALIACISKPTEVPETVHILGA
TTFVSEVTTATLSIMAPLLSRGLAERDTAIKRKAAVIVDNMCKLVDDPQVVAPFLETLYP
ALKTNYANIADPEARDVTLRALNTLKRVGEIVDDKIPEVSTAGDTKVNLAILEKLLEPFK
VDTKKFGLMMQFIASISGDLIDERLTHEADWAESLVAFMVTILPEKDARTVIESLRKQAI
ANIPGATNFEEEDDEGEDLCNCEFSLAYGAKILLNRTQLRLKRGRRYGLCGPNGAGKSTL
MRAIANGQVEGFPTQEECRTVFVDHDIDGTHADTNVVDYVRKTAGESIGTEEEVRKQLLD
FLFTDEMTRMPITSLSGGWKMKLALATAVLRKADILLLDEPTNHLDTVNVAWLVNYLNTC
GITSIIVSHDSGFLDNVCEYIIHYERFKLRKYKGNLSEFVKKVPSAKSYYELGASEINFS
FPEPGFLEGVKTKQKAIVKVQNMTFQYPGTTKPQIRNVSFQCSLSSRIAVIGPNGAGKST
LINVLTGELLPTSGEVYAHENCRIAYIKQHAFAHIDSHLDSTPSEYIQWRFQTGEDRETM
DRANRQITDSDEAAMNKIYKIEGTPRRVAGVHARRKFKNSYEYECSFLLGENLGMKSEKW
IPMGSVDNAWIPRSELMESHSKLVAEVDMKEALASGQFRPLTKKEIEAHCALLGLEPELV
SHSRIRGLSGGQKVKLVLAACTWQRPHLIVLDEPTNYLDRDSLGALSRAIKRFEGGVVII
THSAEFTKDLTEEVWAVMDGVMTPSGHNWVSGQGSGPRLGKKEGDEEEKFDAMGNKIVSE
KKKAKLSAAELRKKKKERMKRKKEQGDAYVSSDDDF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG