YALI0E12573g - IVD1

Overview

Description uniprot|Q6C643 Yarrowia lipolytica YALI0E12573g IVD1 Isovaleryl-CoA dehydrogenase
Locus type CDS
Gene name IVD1
Locus tag YALI0E12573g

Location

Species Yarrowia lipolytica Positions 1529805..1531194
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1390 (nuc.)
Previous locus YALI0E12551g Next locus YALI0E12595g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E12573g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E12573gYALI0E12573g_mRNA-001YALI0E12573g_CDS-001

Nucleotide sequence

 

>YALI0E12573g
ATGCTTCGATCCACCCTCTCACACATGCAAAAGTCGGTTCGAGTGGCCTCCATGGCCCGA
CAATCCATGGCTGCCGCCCGACTCTACTCCACAGACACCAACGGCTCTGGATCTGGAATC
GAGGAGATCGAGGAGCTGCGACAGGCTGCCATTGACTTCTGCGCCGCGGAGATCACTCCC
GAGCTCCAGGAGAAGACCGACGTGGACAACGCCTTCCCCAACCATCTATGGGAGAAGTTT
GGAGAGGCTGGTTTCCTCGGAATGACTGCTCCTGAGAAGTACGGCGGTCTCAACCTCGGC
TACCTCGCCCACTCTGTCGTTATGGAGGAGCTGTCTCGAGCCTCTGGTTCTATCGCTCTC
TCCTACTCGGCGCATTCCCAGCTGTGCATCAACCAGCTGTCTCTGCACACCACCCCCGAG
CAGGGAGAGAAGTACCTGCCCGATCTGATTGCCGGAAAGAAGATTGGAGCTCTGGCCATG
TCCGAGGCCGGCGCTGGATCCGACGTTGTCTCCATGAAGACCACCGCCAAGAAGGTCGAC
GGAGGTTATGTTCTCAATGGTACCAAGATGTGGATCACCAACGGTCCCGACGCCGACTAC
ATGGTCGTCTACGCTAAGACTGATCCCGCTGCCGGTGCCCGAGGAATCACCGCCTTCATT
GTGGAGAAGGGCATGGACGGCTTTTCCTGCGCCCGAAAGCTCGACAAGCTCGGTATGCGA
GGCTCCAACACCGGAGAGCTCATCTTCGAGGACGTGTTTGTGCCCGAGGGCAACGTTCTT
GGTAAGATCAACGGCGGTGTCTACGTGCTCATGTCCGGCCTGGATCTCGAGCGACTGGTG
CTTGCTGCTGGCCCCATTGGTTTGATGCACAGAGCTCTGGACGAGGCTCTTCCTTACGTC
CACACCCGAACCCAGTTCGGTAAGCCCATCGCCCACAACCAGCTGCTGCAGGGCAAGCTC
GCCGACATGTACACTGCCTTTGCCTCCACTCGAGCCTTCCAGTACCAGACTGCCAAGGCG
GCTGATCTCGGCCAGCACACTTCCAAGGAATGTGCCTCTGTCATTCTGCTTGCTGCCGAG
CAGGCCACCCAGGTTGCTCTTGACGCCATTCAGTGCATGGGTGGCATGGGCTACATGATG
GAGACCGTTCCCCAGCGTCTGCTTCGAGACGCCAAGCTCTACGAGATTGGAGCTGGAACT
TCTGAGGTCCGACGAATGCTCATTGGCCGAGCCTTCAACAAGGATTTCGCATAAGGAGTT
TGTGTGTATTGATTGGCGAGCCATGGAGGGTTGAAACTGGCCAGACTTGGTCTCTCGGAG
CTCCCTCGGACACCTGGGATAAAATGTATTTAATTGATATCGTTAACTATCGTACATGTA
CCGGACAATT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E12573g_CDS-001

Protein length: 418 aa.
Product: Isovaleryl-CoA dehydrogenase
Gene: IVD1

>YALI0E12573g_CDS-001 MLRSTLSHMQKSVRVASMARQSMAAARLYSTDTNGSGSGIEEIEELRQAAIDFCAAEITP
ELQEKTDVDNAFPNHLWEKFGEAGFLGMTAPEKYGGLNLGYLAHSVVMEELSRASGSIAL
SYSAHSQLCINQLSLHTTPEQGEKYLPDLIAGKKIGALAMSEAGAGSDVVSMKTTAKKVD
GGYVLNGTKMWITNGPDADYMVVYAKTDPAAGARGITAFIVEKGMDGFSCARKLDKLGMR
GSNTGELIFEDVFVPEGNVLGKINGGVYVLMSGLDLERLVLAAGPIGLMHRALDEALPYV
HTRTQFGKPIAHNQLLQGKLADMYTAFASTRAFQYQTAKAADLGQHTSKECASVILLAAE
QATQVALDAIQCMGGMGYMMETVPQRLLRDAKLYEIGAGTSEVRRMLIGRAFNKDFA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG