YALI0E12551g

Overview

Description weakly similar to uniprot|P32791 Saccharomyces cerevisiae YLR214w FRE1 ferric (and cupric) reductase transmembrane component 1 [Precursor]
Locus type CDS
Locus tag YALI0E12551g

Location

Species Yarrowia lipolytica Positions 1525891..1527830
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1940 (nuc.)
Previous locus YALI0E12529g Next locus YALI0E12573g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E12551g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E12551gYALI0E12551g_mRNA-001YALI0E12551g_CDS-001

Nucleotide sequence

 

>YALI0E12551g
ATGCCACGCATTCTGGCAAGAACCCACCCTGGCTCCGACCCAAACTCGTACCCCATCTGG
AGAGGCAAAAACCCGTTTGAGGACGAGCAGGAGACGGAGAAACTAGCAGCTGCCATCTTC
AAATCTCGAGACTATGCCACATACTACGCATGGACACTAGCAGGCCTGCTGGTGCTGCAC
GTCATGCGATACCAGGGCCGCAGGCTGCTGGCACTGCTACAGAAGAAAGAACACAACAAC
AGAAAGAAGTCGCTGTTTGGACGACTACGCATCTTCCACAAAATCGACCAATGTCTGCTA
TACCACCCGGAGGGAGAGGGCCGGCTTGATGTAGCCACGCATCTCGTGACTCTCATTTTC
ATGGCAGCCACGGCCTTCCTGCTCTTTTACAACATCACCCACTTCATTGTCTTTGGATTC
AGAACCGGATTCGTCATTGCAATCAACTTCCCAATGCTCTACATCCTGGGGGCCAAAAAG
ACACCCCTGTCCTTCCTGGTAGGATGGTCTTATGACCAACTCAACATCTTCCACCAGGTG
GTTGGAATGTGCTGTGTGTACGCGGCCGTCATGCACGCGGCCGTATTCGCCTACTACTTC
AATCCCATGTACTTGATCACCGAGTTCTGGTCGATCATGGGCATCTTGGCCTTCGTGGCC
TTCGTCGTCATTGGTCTGACTAGTCGGCAAAAGTTCAGAGAAAACCATTACGAAATTTTC
TACGTCGTGCATCTGGTAGGCATGCTCGCGTCACTGGTGGGCTTGTACTACCATATTCCG
ATCGCCAAGCCCTTTGCTCTAGCTGCTGGAGCGTCCGTTGTCTACGATAGAGTGGCCAGG
GCTGCAGATGGATACAGAGTGGCTAGAGCATACCTGGAACTTCACAGTGGAGACACCATC
GTTGTAAAGATTCCCAAGAACCAGCCCAGGGAGCTGCTCGGCTCACTGAGCTACTACCCG
TCCTCTTGGAACCCTCTGAATGTCGGCATCCTCATCACAAACGGCCTCATTCACACTCTC
AACTTCTTCATTGGCCTGTTCAACAGACAAACCAAGCTGAAATGGCATTCAGGGCAGCAC
ATGTTCATCACTTTTCTGAGATGTAGGCTTTTCGAGTCGCATCCCTTTACCATTTCGTCG
AATTATGATCACGAAGACAACCTCGAGTTCATTATCCGAGTACGAAAAGGGTTCACCAAG
TCGCTCAAGGAAAAGCTGCTGGCCCAAATGTCTGCCAACGGGCTGTCTGAAGCCGATTCC
CGAAAAATCAGCTGGACCGTCATTCTCCATGGTCCCTACGGAGTCAAGCCTCTTGGTTTG
TTTCAGCCGCCTGCCCCCCAGGAAATTGCAGCAACCGAAAACAGCTGCCTTGTGCAGCAG
CGCAAGATTGTGCTTATTGCCGGCGGATCAGGCGTGGCCTTCACCTTCCCACTCATGCTG
CAGCTGGCGCACCAGAAACGGGAAGTCGAGTTTATCTGGATTGTTCCCGACCGCACTTTT
GCCACATGGGTCGATCTCAGCCACCCGCGTGTGCAGAATGCGTCTGTTTTGATCCACGAG
ACCAAGACACAGGGCAGACCGGATATCACCGAAATGGTGCAATCGCGGCTCAAGGGATCG
TCGTCTTGCGATTGGGTGTGTGTCTGTGGACCAGACATGCTATTGAGACAAGTGAGAAAT
AATGTAGCGGAGTTACGGGGCAATGGCCAGAATGTGGAGCTGTTTGCCGAGCGGTTTGGA
TGGTAATTTTCTCGGTTTAGCAAGTCCAACACAATTGCATCTACTGCAACACAACTGCAG
GTGTATCTCAGTAACGGGGCTGCGGGCATTTCACGGCAAACTTGCACCTGCCTAGACAGT
CGTTTTTCCATAGCAACTTCAGTCCCGCCAAAATATAGACCAGGTATTTATATAGATCAA
TGAGCACATGATACTAGACT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E12551g_CDS-001

Protein length: 582 aa.
Product: Conserved hypothetical protein

>YALI0E12551g_CDS-001 MPRILARTHPGSDPNSYPIWRGKNPFEDEQETEKLAAAIFKSRDYATYYAWTLAGLLVLH
VMRYQGRRLLALLQKKEHNNRKKSLFGRLRIFHKIDQCLLYHPEGEGRLDVATHLVTLIF
MAATAFLLFYNITHFIVFGFRTGFVIAINFPMLYILGAKKTPLSFLVGWSYDQLNIFHQV
VGMCCVYAAVMHAAVFAYYFNPMYLITEFWSIMGILAFVAFVVIGLTSRQKFRENHYEIF
YVVHLVGMLASLVGLYYHIPIAKPFALAAGASVVYDRVARAADGYRVARAYLELHSGDTI
VVKIPKNQPRELLGSLSYYPSSWNPLNVGILITNGLIHTLNFFIGLFNRQTKLKWHSGQH
MFITFLRCRLFESHPFTISSNYDHEDNLEFIIRVRKGFTKSLKEKLLAQMSANGLSEADS
RKISWTVILHGPYGVKPLGLFQPPAPQEIAATENSCLVQQRKIVLIAGGSGVAFTFPLML
QLAHQKREVEFIWIVPDRTFATWVDLSHPRVQNASVLIHETKTQGRPDITEMVQSRLKGS
SSCDWVCVCGPDMLLRQVRNNVAELRGNGQNVELFAERFGW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG