YALI0E12375g

Overview

Description weakly similar to uniprot|Q09778 Schizosaccharomyces pombe SPAC22F3.13
Locus type CDS
Locus tag YALI0E12375g

Location

Species Yarrowia lipolytica Positions 1504233..1507596
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 3364 (nuc.)
Previous locus YALI0E12353g Next locus YALI0E12397g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E12375g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E12375gYALI0E12375g_mRNA-001YALI0E12375g_CDS-001

Nucleotide sequence

 

>YALI0E12375g
ATGGGAATGTGAGTACGAGTGAAGAGCTTTTTATGACAGGCAAAAACTAACACAGGCGCC
GTCACGACTTGGCTAGAGCCATGGCTCTGGCGTTGGAGACTCCGCCCAACCAGCTGACGC
CTCAGGTGCGACAAGAGGTGGTCCAGCAATGTGAGGCGTTCGTGGACTCCAACCTGCCCA
TTTCCGAATCCGAGTCGGCCAAGCTCGGCGAGGATCTCGTTCAGATTTACAAAGATGCCG
TCATGGCCAACCCAGCGGCTGAGGTGCTCTTCTTGCAGTGTATGAGCCGCCTGGCTCCCT
GTCTGGTGGTGGAGGAGCAGGTTCGAACGTGGGTCGATTTGTACTCCAAGCCCGCCATTG
ATTCTGCCGGCCAAAAGAATGATCTCGTGCGGGCTGCCCGTGACCTGCTGGTGGCGTGGA
TGGTGCCCAGAGACAGCGTGGAGGGCAATACGGCGCAGTACCAGGCCATCTCCCGAAGCA
CGGCCCTCTTCATGGTCCAAATCTACCTGCATGAGAGCCTGATTGTGGGTGAGACCAAGG
GCAAAGCTGATGCGAAGGAGGAACGTCTTCGGTTTGTGCGTATGAATGCCAAAAACCTCA
TCCTCACATTCGCCGAAGAACGGCCCCAGGAGTTTTGTGTCATTGCCAACCGGTTCTTTG
TACAGCCTGAGTACCGTGTTAGAATTCTCGTGCTTCTGTCTGCCTTTTTCTCCCAAACCA
AGGCCAAAATTCCGGCGGATCTGGCCCGCTCACAGCTCGTCAAGCACCTTTTTGCATGCC
TGTTGCACGACAAGTCCTCGCAGGTAGTCACCATGGCTGCTTCGGCACTCATCATGATGC
TGCCTTTTATCTGCAGTAAGATCATGACCGACCTGCCCTACTTATTTGCAGTCTACGGGC
GCATGGTGTGCTGGAGAGAAGGAGAAATAACTGACGAAGACGACAACCAAGACGCTTTTG
GAGTAGCCAATGACGAGGAGGAAGAGGAAGAGGAAGAGGTGCACACAGACGACGAGGATA
GCGCTAAATACAAGGAAAAAGAAGAGACCGAAACCCAGTCTACGCTGGACCCAGAACCTT
CTAACGACACAAACACAAATCCACCAACCAGCGACACAGATGGTGGCAAAGAAACAGAAA
ACTCAACTTCTGTGTTTGCCGACTGGCACGCTCTGCCCCGGGACAATGTTCCGGACGCTC
CCAGCCCAGACTGGGAACGAATGTTCACTTTTCTGTATGGACTGTTTCCTTCCAATTTCA
TCATGTTTCTACGGAAACCTACAGAGTACATTTCACAGACTCTGTCGTCTCCTGACGACT
GGGACGAATATTTTATTTCGCAGCGGTCCAAAACTTGCTTTGACCGACACTTGTTGCATG
TTCAACTGCTGACATCCTCGTCGGAGCAAGAACTCAAGGATGAGTACCGATGGGCTGGAA
TGACACCTGCAGACATTGCGTCATTGTGTTTGTCTCTTCTGACAGCATCGCCCGCTGAAA
GATCACGCGAAGACAATCTTTCTGTATCCTCCGGAACTAAGGACAAGGAGAAGGACAAGG
AAATTGTTACTCGATCACGAGGTACGTCTTTGAGTGAGTCGAAACGTCAGTTTTCAATCA
CTTCAATCCCTGACCGAGAATCTACTCCTTCCAGTCAAGTGACAACTTCAACAGAGTCCC
AAGTTGCTGCTGGAGAGCTGCTCTCGCCTACGTTGACATCTACATCTGCCACTGGTCAGC
TTATGGATCTTCAGGCCCGTCACCAGTCTCTGTACGGCAGAAAGGCCGACTTTCCTCCTC
CAGTATCCATTTCCACACTTACTCTTGATGATAGCGATTCTCAGGGTCGAGAAGAGAGTC
CTGTTTCTCCACTGACTCGATACCAGAAACATTCCAGTCTAGGAGCACCCTCAGCCTCTA
TTGAGGGTGTCCTTGAGTCAGGAACTAACTCCAGCCCTGCGATGAGCCCAACTCAGTTGC
CTGTCGGTTCCCCCATTCTCAGAGGAGACTCTACTTCCGAACAGGCCGATATTTTGGCTT
ATTATCAGCGAGAGCTATTGCTGATCAAGAACGAGCTTGATTTTGTCTGTTACTTGGACT
ACCACAACCAGTTCCGCATCCGCCAACTCAAGGAACAGCTTCACAGTGCTCTTAGACAAG
ATATTGACGTTCAGAACCTCGTCACATCCAATCAAAAGCTCAAGCGTCAGTCTGAGCAGC
TCAACTCGCAGTTGGTGAAGATGAAAGAGCTCGGAAACACGCTAAGAACACAAAAGGTAC
AGCACGAAGGTACGCTGACAAAACGTAACCGAGAACTGCGTCTTCAGTGTGACGCGCTGA
CTGAGGAAACTGCCAAAACCAACCTCGAGTTTGAGCACATGCAGGCTGAGAACCAGAGAC
TGTATGCTGCAGCTATGGCCAAGGAGGCTGCTGTCACACAGCTGGAGCTCAAGGTCGAAT
CTCTGGAAAATGAGAATCGATTGATTAACGAGTATAGAGACAAGCTGAAAAGCCTCGAGG
CCTCCGCCGAATCTTCATCCGACAACATACGGGGCTCCGAGACACAATCGTCCAACTCAG
ATCTTCACATTGAGCTGGAGAAAACTAAGATTGACTTAGGAGTCCTGAAACACGAGAAGG
AAACAATGGAGAAACGGTTGCGAGGCGAGATCGCAGAACTTGAAGAGCAGATGACAAACA
TTGAAAAGCAGACTCAGCCCTCACACAAGGTGCTCGAGATGCTTGAGACTATCAAACAGG
AGGCTGAAAATCGGTACCATCAGCTGTCAGTTAGTCATCAAGAGCTGTCTCAGCGGTACC
AAGATCTGGACGAACGATTCCGAACATACGCCGCGTCTTCAGAGGCCGAGAACCTGTCTC
CTGGCGCTGGTGAGCTGTTCAACAACACTAACCAAAAGAGTCTGCTTGGTTACGACGTGG
AGTCCATTGGAGAGTCTTCTGGGAACTCCCACAGAACCACCAAGCAGTCGTCAGCGTCTT
TAGCCGGCTCGGACTCGGCTTACTACCGAGGAGTGCCCATTGGAGGCAACTCGAAGACAC
CTTCTCCTGCAGTTGAGCACTTGGGCATGAACTTTGGAGGCCACGGCAGCCACGCAACAT
CTGCTACTAACATCCCCCAACCCCAGCCTCCTTCGCATTCGCACTCTACATCTCAGGATG
AGGACTCTTCTCGGCCACGAGCTCGAGGGCGGGGAGGATGGCAGAATGCTGCTAGAAAGA
GCGAATCCAAGAAGATCAACTCTTTCCGGGGTTTCTTATAAGGAAAACTGTGGCGCACAG
TGGCGATGCGAAGGAAAAGGAACGCGTTAGCTGTATATATAATATTATTGGAGGTATGGA
CATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E12375g_CDS-001

Protein length: 1078 aa.
Product: Conserved hypothetical protein

>YALI0E12375g_CDS-001 MGMRRHDLARAMALALETPPNQLTPQVRQEVVQQCEAFVDSNLPISESESAKLGEDLVQI
YKDAVMANPAAEVLFLQCMSRLAPCLVVEEQVRTWVDLYSKPAIDSAGQKNDLVRAARDL
LVAWMVPRDSVEGNTAQYQAISRSTALFMVQIYLHESLIVGETKGKADAKEERLRFVRMN
AKNLILTFAEERPQEFCVIANRFFVQPEYRVRILVLLSAFFSQTKAKIPADLARSQLVKH
LFACLLHDKSSQVVTMAASALIMMLPFICSKIMTDLPYLFAVYGRMVCWREGEITDEDDN
QDAFGVANDEEEEEEEEVHTDDEDSAKYKEKEETETQSTLDPEPSNDTNTNPPTSDTDGG
KETENSTSVFADWHALPRDNVPDAPSPDWERMFTFLYGLFPSNFIMFLRKPTEYISQTLS
SPDDWDEYFISQRSKTCFDRHLLHVQLLTSSSEQELKDEYRWAGMTPADIASLCLSLLTA
SPAERSREDNLSVSSGTKDKEKDKEIVTRSRGTSLSESKRQFSITSIPDRESTPSSQVTT
STESQVAAGELLSPTLTSTSATGQLMDLQARHQSLYGRKADFPPPVSISTLTLDDSDSQG
REESPVSPLTRYQKHSSLGAPSASIEGVLESGTNSSPAMSPTQLPVGSPILRGDSTSEQA
DILAYYQRELLLIKNELDFVCYLDYHNQFRIRQLKEQLHSALRQDIDVQNLVTSNQKLKR
QSEQLNSQLVKMKELGNTLRTQKVQHEGTLTKRNRELRLQCDALTEETAKTNLEFEHMQA
ENQRLYAAAMAKEAAVTQLELKVESLENENRLINEYRDKLKSLEASAESSSDNIRGSETQ
SSNSDLHIELEKTKIDLGVLKHEKETMEKRLRGEIAELEEQMTNIEKQTQPSHKVLEMLE
TIKQEAENRYHQLSVSHQELSQRYQDLDERFRTYAASSEAENLSPGAGELFNNTNQKSLL
GYDVESIGESSGNSHRTTKQSSASLAGSDSAYYRGVPIGGNSKTPSPAVEHLGMNFGGHG
SHATSATNIPQPQPPSHSHSTSQDEDSSRPRARGRGGWQNAARKSESKKINSFRGFL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG