YALI0E12353g

Overview

Description weakly similar to uniprot|P32387 Saccharomyces cerevisiae YDR405w MRP20 60S ribosomal protein L41, mitochondrial [Precursor]
Locus type CDS
Locus tag YALI0E12353g

Location

Species Yarrowia lipolytica Positions 1503078..1503900
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 823 (nuc.)
Previous locus YALI0E12331g Next locus YALI0E12375g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E12353g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E12353gYALI0E12353g_mRNA-001YALI0E12353g_CDS-001

Nucleotide sequence

 

>YALI0E12353g
ATGCGACTTTCCGGGGTGTCTCGATTCGGCGCAACGGTCGCCAAGTTACAGCGACCTACC
ATCACTCTGCCCACCAAGCAGGCCTCCGGCATCGACGCCAACAAGTACAAGGGCGGGCTG
CCTCTGCATCGACCCTTGAACCAGGAAGAGCGAGTTGCCAAGCTGGAGCAGGGCATCGAG
TCTGGCGACGCCCATTTCGCGCTGGGTAAGCGGGAGGTGTGGTTCCCTAAGGAGCAGGTT
ATTCTTGTGCGACCCAATGCCAAGCTGACCCCCTACCAGGCGTCCTTTCTCACTCCTCTG
CACATGAACAAGATGGAACTGCGAGACTACCTGTACAACGTCTACGGTCTGCGAGCGCTC
AACGTGCGGTCCGTGGTTTTCCCCGCCGCATTTGAGCGAGAAAACCCCACCCGACCCCGA
TACCGAAAGCGAATGATCAAGAAGATGACTATTGAGATGGAGGAGCCCTTTGTGTGGCCC
GAGGACACTGACGGCTTTCTGGCCAAGATGGAGGAGTCGGCAAGAGAGACCAAGAAGCTC
ATGGACGAGGTCACCGGCCTTGATTCCCTTGGGTCCAGTCGAGATCGACCCTCTACTGCC
TTTGGGGGAATTATGGGCCCCTACAAGAAGGCCGGATCACCTTTCGTGGCCCAGAAGGTG
GCATCCAAGCTTGGCGGCTCCAAGCGACGAGAGGCCGAGGCCGAGGCTCAGCAGGAGAAG
ATGCGAAACATCGCCTTCTACCTGGCCAAGAACAAGCAGGCTGGCATTCCCCAGCCTAAG
ACAAACTAGTCTCTGTATATAGAAAGGATATGTTATGATAGCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E12353g_CDS-001

Protein length: 263 aa.
Product: Conserved hypothetical protein

>YALI0E12353g_CDS-001 MRLSGVSRFGATVAKLQRPTITLPTKQASGIDANKYKGGLPLHRPLNQEERVAKLEQGIE
SGDAHFALGKREVWFPKEQVILVRPNAKLTPYQASFLTPLHMNKMELRDYLYNVYGLRAL
NVRSVVFPAAFERENPTRPRYRKRMIKKMTIEMEEPFVWPEDTDGFLAKMEESARETKKL
MDEVTGLDSLGSSRDRPSTAFGGIMGPYKKAGSPFVAQKVASKLGGSKRREAEAEAQQEK
MRNIAFYLAKNKQAGIPQPKTN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG