YALI0D26752g

Overview

Description weakly similar to uniprot|P39685 Saccharomyces cerevisiae YMR129w POM152 nuclear pore membrane glycoprotein
Locus type CDS
Locus tag YALI0D26752g

Location

Species Yarrowia lipolytica Positions 3555852..3559783
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 3932 (nuc.)
Previous locus YALI0D26730g Next locus YALI0D26774t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D26752g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D26752gYALI0D26752g_mRNA-001YALI0D26752g_CDS-001

Nucleotide sequence

 

>YALI0D26752g
ATGGCCAATCTCAATGGCGCCGGAAGGACCACGTCCAGCCCCGGGTTTAGCCGACGGTTC
GACAGGCGCGACCTGCTTAACACCAGCCGTGATGGCAACACAGCTCCACCTATCAACAGT
GTGCGGGACTCGACAGCCTACCCAGACACTCGACGGAGTTCAGGAGTGGCCAAGCCCATC
AAGACATTTCATGCGACACAAAAGCCGTGGCGTCAAGAGAAAATCACGGTGCCGCCCAAA
AGCGAGCCCTTAATACCCGAAACATACATGAGTGCAGCTAACCAGCGATGGGCAGCCGTG
TCGCTGTTTCTGCTGTTTCTGGCGTCCAAAATCACATATCTGCTGACGCCGGTGTCGCCA
GGAGAGCAATTTGGACTGCTATTCAAATTCTTTGCATTGGATCTAGTCCTGCTGTGGACT
CTTCCACTTTTCCGGATCCCCTGGCTCACGTTTGGCCCCGTGGTGACCACTCTGCTGTCC
TTTGCATTCCTGGGATTCGACATGGGCATTGTCTACTACCGAGAGGGTCTTGTTTTTGCG
CTGGGACTCGGTTCGGCCGTTTGGAGAACGGTCAATGACAAGGAGCTGTCCTTTTCTGGC
CTCAAGATCAAGGTGGCGTCTCTTCAGGATGCCTCTAGTCATCTGATTGGAGAACACATT
GTCCAGATTCTGCCCAAGAGCACTGCGCTGATCAATCCCATGGATCAGCCTTTTTGTCTC
ACTGGTGACAGTGCTCAGACCATTACAATTCCTGTGCGTCTCAACGCCACCGGTCTTTCT
TCTCTCGAACTCAAGTACATTGATTTCGACAACCTCGAGGAAAAGTCGTTCAATTTCACA
AAGAACCAGCTCGTTAAGTTCCGAGGCCGGTCCGACTACGTGCGGTCTCTGGACTACAAG
TTGAAGGACGCCGATAAGAAGAAGTTGTTCTACGTCGAGCTTCCGGTTGACAAGACCGGC
CTGTATCGACTTGGAAAAGTAGTTGATGACTCAAACAATGCTGTTCGAACCTACATGAAG
GACGTGATCGTTGGAGCTTGTCCGGGCGCCAAGTTACGACAAAGCAACGACTCTCTACAT
TTGGGATCCAACAGATGTATTGGCGGCACTGAGCAGCCTAACCTTGTGGTTACCGGAGTA
CCTCCTCTTCGAATCAAGTACTCAAAGGAGGTGGAGGGTCAGTCCTCTGTGTTTTCCGTG
CAGTCCGTTCAGCCCCGTCATTTCGTCTCTCCCATAGCCAGTGGCGATGTCAACAGATAT
GTGTGGAAAAGCGGAGCTGATCTCAGCTGGGCTGTTCCCCATGAAGTGCCCATCCATCTC
GACGCCAGACTCAGCCAGACCGGAAAGTGGGTCTACACAGTGGATGAGGTGGAAGATGGA
CTGGGAAATATCATCAACTACACTGCTATTGCCAAGGGCAAGGACGAGGAGTGGCGAACC
CGACGCCAGCTCACCCACGAGTTCTTTGTCCATCCTCGACCCCAGGTTTCATTCCGAACC
TGTTCTGCTGAAAAACGAGCCCGTCTGGCCGGTGACCATGTATCACTCGACCTCAAGGTC
CAGGCCGAGGAAGATCTGGTTCTCACCATCAAACACACAGACGAGTACGGCAAGTCCGAA
GTATTTAACGCCACGGTTCCTCGAGGCCAGCAGTCAATTCCAGTCTCCAAGGCCGGTATC
TACGAGCTGGAGGCTGTCCAAGGCAAGTACTGTGCTGGTGATATCGTCGAGTCATCCGAG
TGCCACGTTTACGTGCCTCCCAAGCCGTCTCTTTCCGTCGAGTTCACCGATATTCAGGAC
CAATGTGCTGGCCCTGTGGGAGCTACTGCCGAGCTGGCCTTCACCGGTCAGCCTCCTTTC
CATGCTGTCTACCGAACCGTGCGGGACGGACAAGTGATTGACACGCAGAAGATCACCACC
CATAGACTGCGACACCAGCTCAAGTTCAAGCCCCAGTCCGCTGGTACCTACACTTATGAG
ATTGTGTCGTTCAGTGACGCCATTTACAAGCAGCCCCAGGACACGTCTTTCACCAAGAAA
CAGACCATTCGAGTGCTTGCCGGTGCCTTATTTGATAAGAGTATTGCTCGGCAGCGGTTT
GTTTGCTCTGGCGAGTCTGTAGATCTGCCTGTCACTCTACGAGGCGTCCCTCCGTTCACT
CTGGAGTACGAGATTGTTCACGGTTCGTCTCGACGAGTTCCCCACACAATCAAGGATATC
AAGGACCAGAAGCACGTGATTTCCACGTCTGGTTTGTCGCAGGGAGGTCAGTACACCATT
TCTCTAGTGGCCGTCACCGACTCCCATGGATGCAGATCTCTGCTGGACGAGCAGGATATC
CGCGTTGAGGTGCGTCGACAGCGTCCTTCGGCCGGCTTCCTGCCCATTTCCGGCGACTAC
GACGTGGCTGTGCCCCAAGGCTCCCCCGTCAAGCTGCCTGTTACTCTCAACGGTGATGGG
CCATGGAATCTCGAATACGAGTACATTGAGGGAGAGAAGCGAGAACGACATAGGGTGCAG
GTTGGAGATGCCAACGGCTTTTTCACTGTTTCTCGGCCTGGTCACTACCGACTTGTGTCT
GTTCGAGATGCTCATTGTCCTGGAGAGATCACCCATGACGCTATCTTCTCTCTTACTTGG
ATTGCTCGACCTGCCGTCAAGATTGTCAAGGCTGGCAACACCGAGGCTAAGGATGGCGTT
CTCTCTCGAGCTCCTATTTGTGAGGGTGATCAGGACTCTGTTGAGATTGCTCTCGAGGGT
TCTCCGCCCTTCACTGTCCTCTATCGAGTGACTGGACCTGGAGGGAAGACCAAGGACCAT
GAGATCCAGGTGGCCACTCCCTTTGCCAACGTGCGAGTCGAGACAAACGCCCCCGGTGAG
TACGAGTACTTCTTCATGGGTGTCTTGGACTCCAACTACTACGACCGAAAGTGGCTGGCT
GATGTCGGCGCTGGAGATGATGTGGCCTTCTCTGACTCCAGGCTGCGACAGCTGGTCAAG
GCTCGACCCACCGCCAAGTTTGTGGACAAGGGACGCGTTTACCGAGCTTGTCAGGGTATT
GCTGACTCTGCTGACGGCATCCCCATCAAGCTGACTGGCGAGGCCCCCTTCTCTCTCACT
GTTTCCATTCGAGTCGACTCTTCCGGACACACCGAGAAGGTGACCTACAACAATGTAGGC
GCCGACTTTGAGCTCAAGAGCCAGTTGTACTCGCGCCTGGGTCTGGGTAAGCATACTGTG
CAGATCTACCAGGTGGTTGATGCTCGAGGATGTCGACAGTCTAACTTTGGAGCCGACCAG
CGGGTCACCGTGCACGTTGCGGACACTCCTACCATTACTGCTGTTGAGGAGCGAACAGAC
TTTTGTGTGGGCGAGCGAATCTCGTACTCGCTTACTGGTATTCCTCCGTTTGACGTCACC
TACGATTTCAACGGCAATGTGCGAGAGTCGACCTCTGGCACTCTGTTCCGACGACTGGCT
GCCGAGCCCGGTAACCTTACAATTAAGGCCATTTCTGACACTGCTTCCAGTTGTCGAATT
GAGCTGGAGGGAGCCAAGCAGCTGCCCAAGCGAATCCACCCCATTCCTACTGCCCGTGTG
GAGGAGGGCACGTCGCTCATTTTCGACGAGAATGGAGCTGAGAAGGCTGAGATCCACTTC
CACTTGCAAGGCACCCCTCCCTTCCAGCTTCAGTACACCCGAAGTGAGATGATTTCCGGC
AAGGAGGTGGTGGTGGAAACACACACTGTGGGCAGCATCAAGACCCACACTTACACCATC
TGGACTGGTCTGCAGGGTATCTACCGGCCCATTGTGGTGTCCGACTTTTACTGCACCACC
GCCGGTGAGCGGGCCTCTCATTAGAGGCTCTTGTATATGATATGGAATTACGCATTTATT
AGGACGACCTTTGGTAATGAGTTGTAATACGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D26752g_CDS-001

Protein length: 1288 aa.
Product: Conserved hypothetical protein

>YALI0D26752g_CDS-001 MANLNGAGRTTSSPGFSRRFDRRDLLNTSRDGNTAPPINSVRDSTAYPDTRRSSGVAKPI
KTFHATQKPWRQEKITVPPKSEPLIPETYMSAANQRWAAVSLFLLFLASKITYLLTPVSP
GEQFGLLFKFFALDLVLLWTLPLFRIPWLTFGPVVTTLLSFAFLGFDMGIVYYREGLVFA
LGLGSAVWRTVNDKELSFSGLKIKVASLQDASSHLIGEHIVQILPKSTALINPMDQPFCL
TGDSAQTITIPVRLNATGLSSLELKYIDFDNLEEKSFNFTKNQLVKFRGRSDYVRSLDYK
LKDADKKKLFYVELPVDKTGLYRLGKVVDDSNNAVRTYMKDVIVGACPGAKLRQSNDSLH
LGSNRCIGGTEQPNLVVTGVPPLRIKYSKEVEGQSSVFSVQSVQPRHFVSPIASGDVNRY
VWKSGADLSWAVPHEVPIHLDARLSQTGKWVYTVDEVEDGLGNIINYTAIAKGKDEEWRT
RRQLTHEFFVHPRPQVSFRTCSAEKRARLAGDHVSLDLKVQAEEDLVLTIKHTDEYGKSE
VFNATVPRGQQSIPVSKAGIYELEAVQGKYCAGDIVESSECHVYVPPKPSLSVEFTDIQD
QCAGPVGATAELAFTGQPPFHAVYRTVRDGQVIDTQKITTHRLRHQLKFKPQSAGTYTYE
IVSFSDAIYKQPQDTSFTKKQTIRVLAGALFDKSIARQRFVCSGESVDLPVTLRGVPPFT
LEYEIVHGSSRRVPHTIKDIKDQKHVISTSGLSQGGQYTISLVAVTDSHGCRSLLDEQDI
RVEVRRQRPSAGFLPISGDYDVAVPQGSPVKLPVTLNGDGPWNLEYEYIEGEKRERHRVQ
VGDANGFFTVSRPGHYRLVSVRDAHCPGEITHDAIFSLTWIARPAVKIVKAGNTEAKDGV
LSRAPICEGDQDSVEIALEGSPPFTVLYRVTGPGGKTKDHEIQVATPFANVRVETNAPGE
YEYFFMGVLDSNYYDRKWLADVGAGDDVAFSDSRLRQLVKARPTAKFVDKGRVYRACQGI
ADSADGIPIKLTGEAPFSLTVSIRVDSSGHTEKVTYNNVGADFELKSQLYSRLGLGKHTV
QIYQVVDARGCRQSNFGADQRVTVHVADTPTITAVEERTDFCVGERISYSLTGIPPFDVT
YDFNGNVRESTSGTLFRRLAAEPGNLTIKAISDTASSCRIELEGAKQLPKRIHPIPTARV
EEGTSLIFDENGAEKAEIHFHLQGTPPFQLQYTRSEMISGKEVVVETHTVGSIKTHTYTI
WTGLQGIYRPIVVSDFYCTTAGERASH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG