YALI0D26730g

Overview

Description similar to uniprot|Q05497 Saccharomyces cerevisiae YDR338c
Locus type CDS
Locus tag YALI0D26730g

Location

Species Yarrowia lipolytica Positions 3551473..3553419
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1947 (nuc.)
Previous locus YALI0D26686g Next locus YALI0D26752g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D26730g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D26730gYALI0D26730g_mRNA-001YALI0D26730g_CDS-001

Nucleotide sequence

 

>YALI0D26730g
ATGGAGAATCACAAAAACGACCCGGAGTGTAACGCCGCCAAGGCTGCGGCAGCAAACATC
TTCCCGGCCTCGCCCATGGCCAACTCCATGATGTTCGGCTCGTCCTACTCTCAGTCATAC
AATAAGTCTTTCATGAAACGACACTCGGGCGAGTACAACCGCCACTCGGGCGAGTACCGC
CACTCGGGCGAATCCAACCGGTTTTCGGGGGACTTCCAAAGAGTCAACGAAGATCTGGAA
TCTGCATCTGAGACCACCCACCTCAACCCCAGACCTGCCCGACCATCCATGGCCGTGTCC
AGCTCCTCTGAGCCATCTACCAACCATGCATCCAACAACACCATTAGAGAGCCCAGTGAT
ACCCCTGTCTACGGCACCACTGCTGCTTCCATCTCCACAACCTCTCTCGACCCCGAAGAT
AATGTGTGGGAGGATGTCCCCAGCCAAAAGAGATCGCAGGACGTGCGGGAACTCAAAATT
CTCTGGCAGTATTCTCTCCCCCTCGCAGTCACCTTCCTCCTGCAGTACTCCCTTACCGTT
GCATCGATCTTCTCCGTGGGACACCTGGGTAAGGAAGAGCTGGGTGCTGTGTCCCTTGCA
TGCATGACTTCTAACATTACAGGTTTTGCCCTCTTTCAGGGCCTATCGACTTGCCTCGAC
ACTCTGTGTTGCCAAGCCTACGGAGCTGGCAACATGCGAAAGGTCGGCATCTACTTCCAG
CAGTGCGTCTGCATGAGCATTCTTGTTTTCCTACCCATTGCCGCCATTTGGATGTGCTCC
GAGCCTCTCCTGGCCCTCATCATTCCAGAGGGCCAATTAGCAGCCCTGGCGGCACTCTAT
CTCCAGATTGTGGCCCTCGGTGTGCCTGGCTACATCGTGTTTGAGTGTGGAAAGAAGTAC
CTGCAAGCCCAGGGTATCTTCATGGCTGGAACCTATGTCCTGGCAATCTGCGCTCCCCTC
AATGCCTTCCTGAACTGGCTGCTGGTCTGGGATAAGCATGTCGGTATTGGCTACGCTGGA
GCTCCTGTCGCTGTTGTCATCACCGAGTGGGCCATGGCCATACTCATCATCGCCTACATT
GCCTTTGTGGACGGCCGACAGTGCTGGTTCGGCATTTCTCCCCGAGCCGCCTTCTCCAAT
TGGGGCCCCATGCTGCGACTGGCCATCCCCGGTGTCATCATGGTTGAGGCCGAGTTTTTG
GCTTTCGAAATCCTCACTCTCGCATCCTCCTACTTTGGATCTGCAGCCCTGGCAGCACAG
TCCGTTCTGTCGACAGTCATGGCCCTGGCCTACCAGATTCCCTTCTCGGTTGCCATTGCT
GCTTCCACCCGAGTGGCCCATTTCATTGGTGCTGCACAGCCCCAGTCGGCCAAGCGAGCT
GCTCGAATTGCCCTCTACTCCACTGTTCTCATCTCCACTTTCAACTGCACTACCCTTTTC
CTCTTCCGACGGCCCATTGCTGGTCTCTTTTCGTCTGACGTGGACGTGGTAAATCTGGTG
GCCTTTGTGCTGCCTCTGTGTGCCATCGGCCAGTTTTTTGACTGTATTTCTTCAGTCGTG
GCTGGTGTCCTGAGAGGACAGGGCCGACAGAAGATTGGAGGTTATGTGAATCTCTTTTAC
TACTACGCCGTAGCCACTCCTCTGTCTCTCTTCTTTGGCTTTATCTGCAAGTGGGAGCTG
ATGGGTCTTTGGGCTGGTATCATTGTGGGTATTGTGGGAATTGCTGCCACCGAGGCCTAC
TTCGTGCTCACCTCTGACTGGAATGCCATCATCGAGAAGAACGCCGCCATGCATCGAGAC
TAACCGCCGCTCAACAAAAATTACTGTTGCACATTTAAAAACATTAACGAACAGATGAAG
GCTACAAGATACTGCATTGTACCTTCTCTGTCTGGGGACTCTGTCTCTATTGCATATTTA
TATATAGATTAACAATGTGACGCGTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D26730g_CDS-001

Protein length: 601 aa.
Product: Conserved hypothetical protein

>YALI0D26730g_CDS-001 MENHKNDPECNAAKAAAANIFPASPMANSMMFGSSYSQSYNKSFMKRHSGEYNRHSGEYR
HSGESNRFSGDFQRVNEDLESASETTHLNPRPARPSMAVSSSSEPSTNHASNNTIREPSD
TPVYGTTAASISTTSLDPEDNVWEDVPSQKRSQDVRELKILWQYSLPLAVTFLLQYSLTV
ASIFSVGHLGKEELGAVSLACMTSNITGFALFQGLSTCLDTLCCQAYGAGNMRKVGIYFQ
QCVCMSILVFLPIAAIWMCSEPLLALIIPEGQLAALAALYLQIVALGVPGYIVFECGKKY
LQAQGIFMAGTYVLAICAPLNAFLNWLLVWDKHVGIGYAGAPVAVVITEWAMAILIIAYI
AFVDGRQCWFGISPRAAFSNWGPMLRLAIPGVIMVEAEFLAFEILTLASSYFGSAALAAQ
SVLSTVMALAYQIPFSVAIAASTRVAHFIGAAQPQSAKRAARIALYSTVLISTFNCTTLF
LFRRPIAGLFSSDVDVVNLVAFVLPLCAIGQFFDCISSVVAGVLRGQGRQKIGGYVNLFY
YYAVATPLSLFFGFICKWELMGLWAGIIVGIVGIAATEAYFVLTSDWNAIIEKNAAMHRD
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG