YALI0D26411g

Overview

Description weakly similar to uniprot|Q884V4 Pseudomonas syringae Chemotaxis sensor histidine kinase CheA
Locus type CDS
Locus tag YALI0D26411g

Location

Species Yarrowia lipolytica Positions 3513608..3515163
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1556 (nuc.)
Previous locus YALI0D26389g Next locus YALI0D26444t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D26411g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D26411gYALI0D26411g_mRNA-001YALI0D26411g_CDS-001

Nucleotide sequence

 

>YALI0D26411g
GAAGGGACGTGAAAAATATCACCAACCATTAAGCAGCTGGGATTGATAACCAGATACCTC
CACAAAACAGGACTCATTGGGCGGCCTGAAACCAATTTACGCTATAATCAAGATCCCATG
ACCATCCCAGGACGTGCTACTCCACCCTCCTCCACCCCTAACGCGTCACTACTCCACCGA
TTGTTCCGTTACGCAGTCGCCAGATAGCGCTTCCCGATCCGGCAGAGCTGCTGGTAAAGG
GGACGGGAACGTGAGAATGTCGCGCCGGGGGCCAACATAGCACGCCGGATCACATCATCC
AGCTAGATAAGCGAATAAGACTGAGACAGCAGCAGAAGTCGCGATGGTTCGATTGAACTG
CGTAGCTCTCTCCCTCCCTGAAGAAACGATCCACACGCATAATCACTACACAATCTGCGC
AGATCTCGATGATCTCTGGCTCTCTCTCCGCACTCTCCACTCTATTATACAGATTCCAAG
CAGGCACCCAGGAACAAGATTGAGCCCTACCTACATACCGCGTGTCCATCTTGGGGGTCC
TCTAAACATCTACGCACGTACCAGAGGCACTCCTAGATAACCAAGTCCAGGAGACAAAGA
GCCCGCTAGTGCCTCTGCTTGTTGCTTAGCCTAGCCCCCTATGCACGCCACTCTGAACAA
TGAAGAGAGAAATGTTCCGGGTTGAGAGTAGCTGACCAGACCGTTGACTGTTCCAAGGAT
ATATAAGAGACCCCAAAGACCTGGTTTCCCTCCCTCATCTCCTATCACAAACATCTTCTT
TCTCACAAACTAATCTCTTACACAATGGTCTCTGCCAAGTCTATGATCCTTGCTGCCGCC
CTGGCCACCGCTGCTGTTGCCGCTCCTGCCCCCAACGCTGCCCCTGCCCCTGCCCCTGCT
CCTGTTGTTCTCAACGAGCGTGCCTACGAGGAGTTGGCCGCTCGAACAGTCGAGGTCTAC
ACTGCCCACGCTCTCCAGGAGCGAGGCCTTCTTGATCTGGTCGGCTCTCTGACCTCCATT
GTTGGCGTGGTCATCAATCTGCTGGTTGGATCTGTTAACTCTATCATCAAACCTGGCTCT
GCCTCTGCTGCTGAGGTTCTGGCCAAGACCTTCACCGACCTCACCACCGGTCTCAACAGC
GTCGTAGCCGCTCTCGAGGACCTTCCTCTGCTCGGACCCGTGATCGGACTCCTTGTTCCC
ATCATCCTCTCTCCTCTGGTTCTCAGCATCACCACCACTCTCGAGAAGATTGTGGTTCTG
CTTGTTGACGATGTCGACAAGGCAGTGCTTGGCCCCGTCCTTGACGTTCTGCCTGCTCTC
CTCGGAACTCTTGATCAGGTTCTCAACACCCTGCTCGGTGACGTGCCTCTTCTCAGTGGC
CAGGTCAACCCCGCTCTTGCCCTGGTCGACAAGGTTAAGGGCCTCCTCGCTGGTCTTGGA
ATCTCTCTTTAAATGTAGACATCTTCTACAGTAGCTACGGTAGTAGCTACTGTATGTGTA
CTCGGTTCAGTTTCTCCAGAGTTCTACTTAATCTAATATAATAACATAATACTTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D26411g_CDS-001

Protein length: 216 aa.
Product: Conserved hypothetical protein

>YALI0D26411g_CDS-001 MVSAKSMILAAALATAAVAAPAPNAAPAPAPAPVVLNERAYEELAARTVEVYTAHALQER
GLLDLVGSLTSIVGVVINLLVGSVNSIIKPGSASAAEVLAKTFTDLTTGLNSVVAALEDL
PLLGPVIGLLVPIILSPLVLSITTTLEKIVVLLVDDVDKAVLGPVLDVLPALLGTLDQVL
NTLLGDVPLLSGQVNPALALVDKVKGLLAGLGISL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG