| Description | Ylli relics, ENA|AJ319752 Yarrowia lipolytica LINE retrotransposon Ylli |
|---|---|
| Locus type | mobile_element |
| Gene name | Ylli_pol |
| Locus tag | YALI0D25993t |
| Pseudogene | This locus may contain pseudogene(s) |
| Species | Yarrowia lipolytica | Positions | 3456266..3459111 |
|---|---|---|---|
| Strain | CLIB 122 | Strand | Antisense |
| Chromosome | YALI0D | Total length | 2846 (nuc.) |
| Previous locus | YALI0D25960g | Next locus | YALI0D26015g |
Here is a representation of the structure of the locus YALI0D25993t oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :
By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.
>YALI0D25993t
CTCCCCATTGGTTATGAAAGCGACTGCTGGGATGAGCTGGGGGACTTGATGACGGACGTC
TACAACGAAGCTGGAGCCGACTCGCCCATCAGCACCGAACGCAACACCGCTATCATCAAA
CTACTGTACAAGTCGGGAGATCAGGCCGACATCTCCAACTACAGGCCTATTTCTTTGATC
AACACAGAGGTGAAGATCTACACACAGCTCATTAACAAAGCCATCCAGAACATTCTTCCG
GACAGCATTCACGGCGCCCAAAACGGTTTCGTACCGGGTCGACACATCACTAACAATCTC
GACACCATGGATCATTTTTGCAACGCCTACTCCCAGCTGAACATGGGTTGGGTCGTAGGA
TCACTGGACTTCCGGAAAGCCTACGACACTATCAGCCAGAGTTGGGTGATAAAGACGCTT
CGAAATGTGGGTGTCTCGGAACTGATGATCAACCGTATCCTAGCTGTACAACAGAACGCA
GTAACGAGAATCAACATCAGAGGTGTCCTATCTCGCCCAGTCCGCATCAAGATCGGAGTG
AGACAAGGATGCCCTCTCTCTCCAACCCTCTTCATCATCGCAGTAGACGCACTTGTGCGT
CGTCTGGACCGAGAGATGTTTGGACTGGCCCCAGGCCTGCCACTATCCCACCACCACACC
ACTGGGCACAGGCCGCCACAACCCCCTACTCACCCGGAGGCAGTGGCAGCTGGACACATG
AAGGTGTCGGCTTTCGCGGACGACATAGCGGTGTTCCTCAACAACATCCAGGACGTGGCC
ACGGTTGGTAGAGTGCTCTGCCTCTTCCAACGGGTCTCAGGCCTCACACTAAACCCGTCA
AAGACGGTGCTTCAGAAGATCGCCCCCCCCGATTGTTTTGTTCCACTAACCTTTATTGAC
GCAGAATGGCAGCGAACAATTGACGCCACCTGGCCAACCGACAACAACACACGACAGGCC
CCGACGCTCCGGACATCTGACAACATTTTCCGGTACCTCGGAGTACACTTCGGAAATCGC
GAAAGGTTGGACACGCACTACGCTCAGATCAAGGAGGACCTCAAGGAGTCGCTGCGACGC
CTTTCACTATGGGGTCTCCCCTATTACAGCAAGGCGTGGATGATCAACATCTACTTCTTC
TCGAAACTGAATTTCCTTGGACCCTACGTCAGCCAGATCGACAACACCTTCATCCGAGAG
CTGAACGAACTAGCGTGCGACAAGATCAACAAATTATCACCCGACAAAACACGCAAAACC
TTCAGCAATGGTTTCATCCAAACTCCGGTAGGCAGAGGAGGACTGAACCTGCGGGACATG
GGACGTTTCATGGTGTGCCTGAAGGCCGCTCGGGCTTACAGGTTCTTCCATGGCTCATCG
CCGGCCCTTTGGGACTGCACCTTCCAGTTCTACAGCAGAACTCACAGTCTCACACAGGAA
AAGCCACACCAGCGCGTCGACTGCCGCTTTCCGACAGGCCAAGCTTGGGGCTACGCAGCC
TCCCCCACCATGCGAGACGCAATCAGAGCTTCTTTCGAGCTCAACAAGCCCCTCACCGCG
GAACATGCCAACCCTCGAGAAGATCACGAGCCCTCTACAACAGACACAGTTAATCACAGA
ATCTGGGAACGAAACCAGGTGAACGTGAGAGCAGCAGAATCTTTCCGGGAAGCGCACGTC
GACATCGCAGCCGCGAGACGATACCATCCGGTCAGAATGGTGTCCACAGCGGAAATCGAC
CACCTCCGGTGGAGCATGGGACCACTTACTCTGGAGAACTTCATGTTTCACAAGACCTCG
TCTCCCGACTTGCCAAACTTCCCACAAACACTTGCACGACCGAAGAAGTGGACTCAACGA
AGCGACTACGGGGGCATCTCTGACGACATGGTCTGGCAGGAGGTAATGCATGACCTTCGA
AAACACTACATCGCCGACGCCAACAAAGCACAAGTTCTTCACCTCATGCGGATATCTCGA
CTTCCGCTCGTGAAATGGAGATACCCTGACGACCACGTTTTCACCAAGAAGAATCCAGGA
TGCGGGCTCTGTGATAAGGCCATCATTCAGGATCTGCACGAGCATATCTTCTGCAAGTGC
GAAGTTCTTCTTTCCATGTTGACCAGGATGAAGATTCCGTCAGTGGACTCTCTAAAGGAC
TGGATCTTTACCGAGTCGAAATGTGGAGTACTCCCCTCTTTCCCAGGGCATGTGAACAGT
GACGCCCCCCGGAAACATCAACAAGTCAAGACACGCAAATATCTGCGGGAATTGGCTTAT
GGGATCTGGAAGATGGAGAGATCCCTCCGGTACTCAGGGGACGACGCCACCCTGGGACAT
GTCCAACAGGGTTTGCTTCAATTCCTGAAGGAAGCCCAGATGTGTTTCTACGATGGACAA
CCGCCAACACTTCACGATGAGCGAGAGTAGAGACAGTAGCAAGCGTAAAAGGCGGCCGAG
GCCACCGAGAGAACAGCGTAACAGGGCGCGTAGTCACCACAGGGGACGCAGAACCAAACC
AATGACGAAGAAGAACCACAAGGAGACGTTTTCAAAGGCAATGCAAATGAAGAGGGCAAT
GGAAGGATTGAGATTAGAGAACTGGAGACTGGAGTGGCGTTTTCCCGATGAACGAACAAA
CACGCGAAGCTATGTGGACCAACATACAACACGGACTGAACCAGGTTTTTTTATGATTTT
TTTACTGGAAATAGGTACGTGCCAAGTTGGACCATGACACTAAACGTGTTTAATTAGTAA
TATTCGTATAAGCGTACATTCATTTCAAAGGTTATTCTTTCACGGCAAAGTTATAATTAA
ATGAATGTATATGCAGAAAAAAAAAA
Locus sequence
Up/downstream sequence
Protein length: 810 aa.
Gene: Ylli_pol
Browse the locus neighborhood with JBrowse:
ATG