YALI0D25960g

Overview

Description similar to uniprot|P46367 Saccharomyces cerevisiae YOR374w ALD4 aldehyde dehydrogenase, frameshift
Locus type CDS
Locus tag YALI0D25960g
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 3452051..3453609
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1559 (nuc.)
Previous locus YALI0D25938g Next locus YALI0D25993t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D25960g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D25960gYALI0D25960g_mRNA-001YALI0D25960g_CDS-001

Nucleotide sequence

 

>YALI0D25960g
ATGACCATGACCACCGAACTCACTCTGGCCAACGGCCTCAAGGTCACCCAGCCCACTGGC
CTCTTCATCAACGGCGAATTTGTGGCCGCCAAGGACGGAAAGACCTTTGCCACCGAGAAC
CCCACCACCGAAGAGGTTATCTGCCAGGTCGCCGAGGCCGACGAGGCCGACGTGGAGGCC
GCCGTCGACGCTGCTTCCGCTGCCTTCAAGACCTGGGCCTTCAAGACCGCCCCCTCCGAG
CGAGGCGTCCTGCTCAACAAGCTTGCCAACCTCATTGAGCGAGACCTCGACATTCTGGCC
GCCATTGAGACCACAGATAACGGAAAGGTGTACGCCCACGCCAAGGGCGACGTTGGCCTC
GTCGTCAAGGTCATCCGATACTACGCTGGATACGCCGACAAGATCTACGGAGACATCATC
CAGGGCAACGACGGCCACTTCTCCTACACCCGAAAGGAGCCCATTGGTGTCTGTGGCCAG
ATCATCCCCTGGAACTTCCCCCTGCTCATGTGGGCTTGGAAGATTGGTCCCGCTCTTGCC
ACCGGTAACACCGTCATCCTTAAGTCCGCCGAGTCCACCCCTCTGTCAGCTCTTTATGCT
GCTTCTCTCGTCAAGGAGGCTGGCTTCCCCCCTGGTGTTCTCAACATCCTCTCTGGTTAC
GGAAAGGTCGGTGCTGCCATGACTAACCACCCCAAGATCCGAAAGATTGCCTTCACCGGT
TCCACCGCCACCGGTAAGCAGGTGCTCAAGTCCGCCGCCCTTTCCAACCTCAAGAAGATC
ACCCTGGAGCTTGGTGGAAAGTCCCCCAACATCATCTTTGACGATGCCAACATTGAGAAC
GCCCTGTCCTGGTCCGCTCTCGGTATCTTCTTCAACTCTGGTGAGGTCTGCTGCGCTGGA
TCTCGACTCTACGTCCAGGAGGGCATCTACGACAAGGTCGTGGAGGCCTTCAAGAAGAAG
GCAGACGAGGTTGTTGTTGGCGACCCCTTCAACTCCGACACCTTCCAGGGTGCTCAGACC
TCCAAGCTCCAGTTTGACCGAGTCATGGGCTTCATTGAGGCTGGAAAGGCCGAGGGAGCT
ACCCTGCTGACCGGAGGCTGCCGAGCCCAGGACAAGGGATACTTCATCCGACCCACCGTT
TCACCGACGTCAAGCCCGATATGAAGATTGTCCAGGAGGAGATTTTTGGTCCCGTTGTGT
GTGTCACCAAGTTCAAGACCGTCGATGAGGTGCTTGCTCTGGCCAACGACACCGAGTACG
GTCTTGCTGCTGGTGTGCACACCCAGGATATCTCCAAGGCTCACTACGTGGCCGAGAACC
TGCACGCCGGAACCGTCTGGATCAACTGCTACAACTCCTTCCACGAGGCCGTTCCCTTCG
GCGGCTTCAACCAGTCCGGTTTCGGCAAGGAGATGGGTAAGGACGGTCTGGACAACTACA
TTCAGACCAAGGCTGTCCGAATCATGCTGGACCAGGCCAAGCTTGCTTAAGTGGGGGGCA
TTTGTGCAAAGACTCTAGTGTTATGATTGAATGAATAAATATATGACTGTAAAGGAGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D25960g_CDS-001

Protein length: 496 aa.
Product: Mitochondrial aldehyde dehydrogenase, putative

>YALI0D25960g_CDS-001 MTMTTELTLANGLKVTQPTGLFINGEFVAAKDGKTFATENPTTEEVICQVAEADEADVEA
AVDAASAAFKTWAFKTAPSERGVLLNKLANLIERDLDILAAIETTDNGKVYAHAKGDVGL
VVKVIRYYAGYADKIYGDIIQGNDGHFSYTRKEPIGVCGQIIPWNFPLLMWAWKIGPALA
TGNTVILKSAESTPLSALYAASLVKEAGFPPGVLNILSGYGKVGAAMTNHPKIRKIAFTG
STATGKQVLKSAALSNLKKITLELGGKSPNIIFDDANIENALSWSALGIFFNSGEVCCAG
SRLYVQEGIYDKVVEAFKKKADEVVVGDPFNSDTFQGAQTSKLQFDRVMGFIEAGKAEGA
TLLTGGCRAQDKGYFIRPTFTDVKPDMKIVQEEIFGPVVCVTKFKTVDEVLALANDTEYG
LAAGVHTQDISKAHYVAENLHAGTVWINCYNSFHEAVPFGGFNQSGFGKEMGKDGLDNYI
QTKAVRIMLDQAKLA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG