YALI0D24948g

Overview

Description weakly similar to uniprot|P40303 Saccharomyces cerevisiae YOL038w PRE6 20S proteasome subunit (alpha4)
Locus type CDS
Locus tag YALI0D24948g
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 3326079..3326708
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 630 (nuc.)
Previous locus YALI0D24926g Next locus YALI0D24970g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D24948g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D24948gYALI0D24948g_mRNA-001YALI0D24948g_CDS-001

Nucleotide sequence

 

>YALI0D24948g
GTGGAGTACGCCTTGGAGGCTTTTAAGCGAGTAACCGCAGCCGTCAGTGTCAAGGACAAG
GATGTCGTCATTCTGGGATGCGATGCGAAAAGCGGCCTGCTTTCAAGCTCCAGGACTTTC
GAATCACCCCCTTCAAGATCTGCAAGGCAGGACATTCATGTGTCTCTGGTCTTTGCCGGT
CTGAATGCCTACGCCCGAATCCTCGTCGACAAGTCATGGCCCGAGTTGACACTCAGTCTC
ACCGACTCGCAGTCGAAGACCCAGTTTCCGTCCAGTAAATCTTCCGATACATTGCTGGTG
TTCAGCAGCGATAGACCCAGTCAGGTGGTGTGCGGCCATTCGGTATCTCTACTCTGATTG
TTGGATGGACCTCAGCGACAAGGTGCCCAAGCTGTACCAGGCAGAGCTCTCTGGAATCTA
CATCTCGTGGAAAGCCAACGCCATTGCATGACTGTACGACAGTTCCAATATTGGCCCAAT
TGCAGAGAAAACAACCCCAATCGATACTCCGAGTCTCATCGATTTCATCGGTACAACTTT
CATCTGTCTAGCATCCGGAGTTTACATTGCTGGATGGCACTTTAGATGTATTAAATACTT
AGCATTTAGTTAACCAGAGCTATTAAAAAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D24948g_CDS-001

Protein length: 150 aa.
Product: Conserved hypothetical protein

>YALI0D24948g_CDS-001 VEYALEAFKRVTAAVSVKDKDVVILGCDAKSGLLSSSRTFESPPSRSARQDIHVSLVFAG
LNAYARILVDKSWPELTLSLTDSQSKTQFPSSKSSDTLLVFSSDRPSQVVCGHSVSLLDC
WMDLSDKVPKLYQAELSGIYISWKANAIA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG