YALI0D24926g

Overview

Description weakly similar to uniprot|Q9UUC9 Schizosaccharomyces pombe Hypothetical 50.3 kDa protein
Locus type CDS
Locus tag YALI0D24926g

Location

Species Yarrowia lipolytica Positions 3322156..3323725
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1570 (nuc.)
Previous locus YALI0D24904t Next locus YALI0D24948g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D24926g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D24926gYALI0D24926g_mRNA-001YALI0D24926g_CDS-001

Nucleotide sequence

 

>YALI0D24926g
ATGTCCTTCAAATTCGACTGGGAAAGTCTGCGTGACGAGTCGTTCTATGAGCGCGCTAAG
ACGATCCTCGCGGACGCGCTGAACTCGGACTCCAAGCCGCCCATCATCGTGGACGACATC
ACCGTCAAAGACCTCGACCTGGGCGACGAAAGCCCGTTTCTTGAGATTCTGGAAATTGGC
GACATGGCAGACGACCGGTTCAGAGGCATCTTCAAGCTGAATTACACGGGCAACGCCAGC
CTGACACTGACCACAAAGGTCCAAGCCAACCCGCTCAACGTGTACCGACAGAGCTTTGAC
CAGAGCTCGTTTGTGGCACCACAGTTCCTCGCGGCCGGCAGCTCTCTGGCCATTCCGCTC
AACCTGACACTCTCCGACATCCGTCTCTCGGGAATCATCATTCTGGTCTTCTCCCGAGCC
AAGGGCCTGACTCTGGTGTTCCGAAACGACCCGCTGGAGAGTATCAAGGTGTCCTCAACC
TTCGACGCCATCCCCCCGCTTGCCAAATTTCTCCAGGTCCAGATTGAAAACCAAATCCGA
GGCCTGTTCCGGGAATTGCTACCGGGCATCATCCACAGACTGTCGCAAAAGTGGGTCACC
AGAGACGAGACAAAGTCCAACAGCAACACGGTCATGTCTCCCCACGTGACCCAACCCCCC
TCGCCAAAGCTCAAACCCGTGTCCATCATGGACATCAACCCGGACCTGCCTGCGCTGTCG
CCTACTAACATGCTCAAGATCTCTGCGCTGTGCGCCTCCCAGCGAACCCTGTCGCTCTTT
ACCCCCTCCATTTCCGATGCAGTCTACCGGTCCAACCTGGAGCAATTTGACGTGGTCGAC
GAGGAGTCACAGTTCCAGAGCGAGGACCCGTACGATATTGTGCGTATCCAGAGCAGAAAC
TACTACCGGCATAACCACCAGGCTCCCAAGAGACGAACCATCAAGTACAAGCGCAAGTCG
AAGAAGACTGACGAGGGCGACAATGCTTCCACCGAGGTCACCACTCGAGAAACAACCCCG
TTGCCCACCTCCTCCACTCCGCTTGAGACGTCCACTCCCTCTAGAGAGGTCATTCGAGAA
GTCAAGGAGAAGTTGCTGGCTGAGCCGTCCTCGGTGGTCATGTCCCCGTCTGAAGAGAAG
ACTACTCTGCGATCCATCCCGCCTCCCCTAGAACTATCTCCTCCCTCTCTGGATCTGTCC
ATTGACACTTCTCTGCGGCCCTATGCTTCCAGAAACAACACCCCCGAGAAGAAGGAGAAG
CCGCAGAGACCTGCAGGGCCCAGCAAGAGAAACACACTGCCTGCGCCGACAAAGAAGGGT
CCTGGGTTCTTTTCGTCGAATCTAGCGGGTTATGATGTGCCCCCTCCGGCCTATTCGGGT
TAAGAGGACGGCGCTGTTTTCGAGCCGTGAACAGCTGGGAGAGCGACTGTATCTCCCAAG
GTGAGGCACTTTTTTTTCCCAACAGTCGGGGTTTATTCTCAGCTGTTGCAGGTAAGTTCC
ATATGGTGGTCCCTTGATAGCGTTATTTATATATTTATTGTACATAGGTAAGGATGAGAT
TTTGTGGTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D24926g_CDS-001

Protein length: 461 aa.
Product: Conserved hypothetical protein

>YALI0D24926g_CDS-001 MSFKFDWESLRDESFYERAKTILADALNSDSKPPIIVDDITVKDLDLGDESPFLEILEIG
DMADDRFRGIFKLNYTGNASLTLTTKVQANPLNVYRQSFDQSSFVAPQFLAAGSSLAIPL
NLTLSDIRLSGIIILVFSRAKGLTLVFRNDPLESIKVSSTFDAIPPLAKFLQVQIENQIR
GLFRELLPGIIHRLSQKWVTRDETKSNSNTVMSPHVTQPPSPKLKPVSIMDINPDLPALS
PTNMLKISALCASQRTLSLFTPSISDAVYRSNLEQFDVVDEESQFQSEDPYDIVRIQSRN
YYRHNHQAPKRRTIKYKRKSKKTDEGDNASTEVTTRETTPLPTSSTPLETSTPSREVIRE
VKEKLLAEPSSVVMSPSEEKTTLRSIPPPLELSPPSLDLSIDTSLRPYASRNNTPEKKEK
PQRPAGPSKRNTLPAPTKKGPGFFSSNLAGYDVPPPAYSG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG