YALI0D24101g

Overview

Description some similarities with uniprot|Q8TG35 Candida albicans Mnn4p
Locus type CDS
Locus tag YALI0D24101g

Location

Species Yarrowia lipolytica Positions 3162203..3164711
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2509 (nuc.)
Previous locus YALI0D24079g Next locus YALI0D24123g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D24101g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D24101gYALI0D24101g_mRNA-001YALI0D24101g_CDS-001

Nucleotide sequence

 

>YALI0D24101g
CAACACTAACAGATAGACGGCGAGATGTGAGTATTGGTGTCATGGCAGCGACGACATGGT
CAGTGTGGTGACAAGATGGCCAATGTGATGGGGCGACATGAGCCTTGTGGTGGTGCGACA
GAGCCGTGCGACAGAGCCGTGTGGTGGGACGGCCTGGTCAGGGTGGACACTCCATTGTCA
ATGTTGTGATCACAGAGACCATGTCGCGAGAGACATTGACTATGTTGGGACCCACATAAC
GTCGTCAGTCCCAGCCGCAGACACTGTCATGTATCGTGCCCACGTTCTTACTAACTCAGG
GACATTGAAAAACAAACGCATCGGTCGCCGTACCGCTCGAAAGCACTGAGCATGGTGCTG
CACCCGTTTCGCCTGCTGCGCACATCTCTTGTGAGCAAGCTCGTCGTCATTCTCATAACC
TGTCTGATTTTCGGCAGCTTACTCAACTTGACCGACAAGCTGCCCGACGGAGTCAAGTCA
CGGGTCGCCTACATGACCGACGTGGGCTTAGTCAGCGGCGGTGCCCGCTCGAAAGCCATG
GCCGGCAACTCGTCTGTGCGCATCAGTCACGTGCCACTGACGAAAATCAAGTTTGCCGAA
AACGAAAAGGAATTCAACCCCAAGTGGGCCCAGAAGAAGGCTCTGGACTCGTCGTCGGAT
TACTCATTCGAGTGGAAAGACTGGGTCGACTTGACCGAGGTCACGGGTCTATTCAGAGCC
ATCGAGGTCGGCTCGTGTGGCAAAAACAAACAATGCCTTAGTAAGCTCCAGGTCACCGGA
CCCCCGACTCAGGTGGAGCCCCAGGCGTTTTTCAACCGGGTCGGAAAGGTGTTTTTGGAC
CAGACCATGCCCAAGCCGAAACAGTTGATTTATCTGACCGAGAAAGAGTCACGTGGCAAG
CGGGAGGAGCCCGTCGAGATAGAGTCACATGTTCCGGTGGTTCGGGAGCCTGAGTTGGGC
GACTTTAGCCGATCGCGTGACGCCAAGTCAATCCAAAATGCTAAGCGGGAGGCGACTGAG
GAGGCGACTGGTGAGTCAGCCAACGAGGGCCAGTCACGTGACTCCGCACGAGCCTCCGCG
CGTGACATTGCCTTTTCCGAGGCTGACCCCGTGCACGAAGACTCGTATGACGACGACGAA
AACGGAACCATTCTCGTGCCGACGGCTGAGTCAGAGGAGGAGCTCCAGGAATACGCAGAC
AAGGACGCGGCCGCCAAGTCGTACCTGCGAAGCGGCTGGTCACGTGGCCAGAAATATGTC
GAGCTGCCGCGCGAGCTGTTCACTTGGGACATTCACGAAGAGATTGACAAGGGACTGACT
AAGAAGAGCGTTGACTCAGACGACCCGTCACGTGAGCAGGTTGCGCACTCGCAGTTTCTT
AGTCAGCATTGGAAACACATCAAAAAGTCCGGCAAGCATTTCTCCGAAGCGTGGGTTGTG
GGCGACACCAAAGCAGCCGGAGTCCATTACGACTGGCGATTTTTCAGCGAGTTAAACACC
ATTGACGAGAAACGAGTCATCTTGCGTAAATTGGTGCGTGCGTGGCTCGACTTCACGTCA
CGTGAGGGCATTATCACGTGGCTGGCGCATGGCACGTTGCTGGGCTGGTACTGGAACGGC
CAGTCTCTGCCGTGGGATTTCGACGGTGATGTCCAGATGCCGATCCGCGAATTCGACCGG
TTTGCCCGCCTCTATAATCAGTCGTTGGTAATTGATGAGTCAGCCGGCGGCCGGTATTAT
GTCGATGTGGGTCCCTCCTACGTCGAGCGCCTCCGAGGCAACGGCAAGAATGTCATTGAT
GCTCGGTTTATCGACGTTGATAGTGGCATGTACATTGACATTACCGCCTTGGCGTATGCC
GAGCAGCAGGAAAAGTTCCACTGCAAAAACTGGCATCGGTATGAGTTGGAGAGCGTTTCT
CCGCTGCGTCGGACGCTGTTTGAGGGCAAGGAGGCTTACATTCCAAACAATTTCGAGTCC
ATTTTGAACCAGGAGTACAAGAAGGCGCCGCTGGTGAACACCCGGTTCGAGGGCCACTTC
TGGAACAAGTTTATCAAAATGTGGGTTCAGCAGGACCAGTGTGAAATGTTACAGATTGAG
GAGAATGTGGACCAGCGGGCAGTGAGGGAAAACGGTGAACCCACAACTTTTGGCGCTTGT
TATCGACCGGAGTATCTCAAGAGGTATCACGAGACCCACAAGATGAGTAAGGCTCATGAG
GGGGAGATGGAGGCAATCAGGCAAAAGGCCGATGTTTGGGAATGGATTCGCGAGGAGTTT
GAGTAGAAGGGGTGACGGCGTGAGAGAGGTCACGTGAGAACATCACATGAGGAAAGGGAT
CCAGGAGAGACCAGAGCACGTGGATTGTAGCTCACCTCAGAGATGGTCACCGGAAGTTAA
TGAGGAGATCATCATCAGGAGTGGTGCAAAGTCCTTATGTTGGTCACGTGCGTGTATCGA
GCATGTGGCGACAGGCGGATTCTAGTTAGGAATGTATTTATTGTCAGGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D24101g_CDS-001

Protein length: 663 aa.
Product: Conserved hypothetical protein

>YALI0D24101g_CDS-001 MDIEKQTHRSPYRSKALSMVLHPFRLLRTSLVSKLVVILITCLIFGSLLNLTDKLPDGVK
SRVAYMTDVGLVSGGARSKAMAGNSSVRISHVPLTKIKFAENEKEFNPKWAQKKALDSSS
DYSFEWKDWVDLTEVTGLFRAIEVGSCGKNKQCLSKLQVTGPPTQVEPQAFFNRVGKVFL
DQTMPKPKQLIYLTEKESRGKREEPVEIESHVPVVREPELGDFSRSRDAKSIQNAKREAT
EEATGESANEGQSRDSARASARDIAFSEADPVHEDSYDDDENGTILVPTAESEEELQEYA
DKDAAAKSYLRSGWSRGQKYVELPRELFTWDIHEEIDKGLTKKSVDSDDPSREQVAHSQF
LSQHWKHIKKSGKHFSEAWVVGDTKAAGVHYDWRFFSELNTIDEKRVILRKLVRAWLDFT
SREGIITWLAHGTLLGWYWNGQSLPWDFDGDVQMPIREFDRFARLYNQSLVIDESAGGRY
YVDVGPSYVERLRGNGKNVIDARFIDVDSGMYIDITALAYAEQQEKFHCKNWHRYELESV
SPLRRTLFEGKEAYIPNNFESILNQEYKKAPLVNTRFEGHFWNKFIKMWVQQDQCEMLQI
EENVDQRAVRENGEPTTFGACYRPEYLKRYHETHKMSKAHEGEMEAIRQKADVWEWIREE
FE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG