YALI0D23925g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D23925g

Location

Species Yarrowia lipolytica Positions 3121575..3124535
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2961 (nuc.)
Previous locus YALI0D23903g Next locus YALI0D23947g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D23925g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D23925gYALI0D23925g_mRNA-001YALI0D23925g_CDS-001

Nucleotide sequence

 

>YALI0D23925g
ATGACTCCAACAACGCCGATTCTGTCGCTGGCATCCAACCCCATGGGCAAGATTGACGCG
TGGAACCCCGAGTCGCTGGCGTCGCTGTGGACGGTGTTCTCCAAGTGCGCCGAGTCGCTG
GAAAACGGCCGCCGGCTGGAAAACCTGTCGTGGCGGCTATGGAACCGCGAACTGCTCTAC
TGCTGCGACAACTCCATCTTTCTGGTCGAAGACATGACCGACGACGGCAACACCGGCAAC
AACACCGGCGTCAACACCACCGCCACCACAAACGCAAACACAAACACACACCCCTCCGCC
CTCGCCACACCCAACAACAGCGTCCAGACACGACACACCCTGCATCCCCAGAAACCGCCA
CCGGACGATCTGCTCAAGTCGCTGTCGGCACTGTCCGTGTCCAACGCCGAAGAGCAGCAC
CGACACGATGCCTCGCAAGACCGTAACGACCGACATGACCGAGGAGTCTCCCCACCACAG
CTCTCAAGCAGCCTCAGCTCCGACGCCATTTCGGACTCGGACTTTGACGGAGACGCAATC
GGCGAACTCGCCTCCAGGAGAGTGTCCACCACGTCCACCGCCTCGACCCACGTGGACAAC
CAGCATCGATCGGCCCTCTCCTCCCTGCATTCTACCCGATCGAACACCAACAGAAGCAAT
CTCGCCTCGTCAGCCTCCACACCAACCCTCTCAACCACCACCGCCACCCCCGCCGTGTCG
CGCATCTCGTCGCCACCCACGCTGCGCACCCTTGTAAATAGCAACGACACAAACTCACGG
CCTACGATCCGGCGCGGCAACAAAAGCATCTCCGACTACCGCTCTCTGTACCGCAAGCGT
CCCTCTATGAAACGCAAGCGGCTGTCTCCGGCAAAGCTGCACGAGTTAATGCAGTTATTT
AGGCCGGTCGGCCAGGAAGTGGAGTATTGGCAGAGCCTCAGGGACGAGCGGAGGAAACAG
AGAGAGGAGGAGGAACGGGAGGGAGACGACGACCATGGCGATGAACATGACGAGCTATCC
GAGTCGTCAAACAGTGTAGGAAGTCACGTCCATGTGGGTGGTGGTAGCACCAACGATACC
ACCCATGTGATGCTCCCCAGGGAGGTTTTGACCAAGGAGGAGGGCAAAAAGGAGGCTGCG
ACAGGAGCAGCAACAGCAGCGAGAGAGGTGTCTACCGGAACAGGTGCGGGAGTCGGTCAC
AAGGATAAGGATACATTGTCCAAGGACGTGACGTCCAACACCTCTTCCAACGCCCACATC
AAATCCACTCTGGCGCCCACGTTCTTTGCTCGGTCCCGACGCTCTTCGTCCCGCCACAGA
GACTCGTTCAACCGGGAGAAACCGGTGCTTGTGGCGCCCCGAACCGCTCAGCAGCAGCAG
CCCAAGGTGTCGTCACTGTTCCGACGCAACACCAGTGTCTCTTCCGGGTCGGGATCCTCG
GCCGCAGCTCTTCCGCAGTCGTCAGCCTCCGCAGTGGCTGACTCTGACTCGTACGAAGAC
GATGAGTCTGATTTCACAGATGAGACTGATAACGACGATGACATGGAGGCCGACGAGGGC
GCACGTGGCGTGGCTCGTGAATTGTCCGGCTCCGGGTCCGTCTCGGGAGGGAACCTGAGA
CGTTCGGATACGTCAACCTCGATTGTGCGGGGTTTTTCGCCGTCCAAAACGTCCGTCAGT
TTCCTCGGTCGGTCGTCAGAGATGAAGCAGCATGGGGCTGCTGGTAGCGGTGCTGGCATT
GTGAGCGCGGGCGTCAACGGCAGTTCTGTCAATGGCACTTCGATTACAGCCTCCTCCCAA
TACCAGCAAGTGCCTCGGCAGAAGCAGAAGATGTTTTTCATCGAGTCTTCGCCATCGGAG
AGCGACGGATTTGGCGAGTCTGTGACGAAATCCGACTGTTCGTTTTCGCCTCTGAAGATG
GAACCCCGACTGAGCGGGCAGAGCGGTCATGCGGCCTCCAAATCAAGTTTGGTGGACCGA
TCGGTAGAAAAGTCGGTGGACAAGTCGGTCAAGAAACATGTGTCGGTACAGTCACCCCCT
AAGCTCGACTCCACCAAGTACGACGACTACTACAACGACGACGACGACGACTCTGACTGG
GACTCTGTGGAGAGTGATGGTTCTTCTGCAAATGAGGAGCCCACATTTTCACGGGAGGAA
AACCTTTCAGGCCACAATCTCGTCCGTCCGTCGCTTCTGTCGTCTATGTTCCTCAACAAC
CCCGATCGTTTGCAGGAGCAGATACAGCAGAGCAAGGACAAGTCACGCATCTTTTCCAAG
GGCATGATTCCGGACGAGTCCAACTCTGTGAGTTCCAAGCTCGGCTCCATGTTCTCTGGC
CAGGCAAAGCGGGTAAACACCTACACCAACTTGTCTGAGGCTAACTATATTGTTGAAAAT
GGCGGTCTAAACAGCGACGGTGAGGATATTGCACGAGACAACGCCTCTGTGGCTCGTTCT
TTGGGGGTCAAGAGTGCCAAGAGTGCTGGAGAGAAGGACAACAAGCGGCCCAGTAAGAAC
AATTCTGTGGCTGACCTGTCGCGGTTCCCCGGAGTCGGTCCTACGCCTGCCACAGTTCTC
TCGGCCACCCCAGTGGCTGTGGCGACGCACGAGCCTGTTTATGGTTCGATTCTGCCTTCC
GACGTGGTCAGACACAGTATGTTGGCATCGGAAATGTCGCAGAGTGTGCAAAAGTCGCTC
ATGAACCAGAGCGAGTTGGAGCGGCAGAATCTGGAGGCGTTGAAACGGCGGCATACCAGT
ATTGATCTGAAGAAGATGGGGGAGAAGCCGGAGTGGAAAAAGGAGGCGGACGAGCCGGCG
GATTTCGATTATCATGCCAGAGGGTGGTAACGGGCTCATAGTGAGTACCACGTTCTCTAA
ACATTCCGTGGCTCGTGACCGTATATATTCAGCCATCTATGAATGGCAAGTAATTTATTG
CATTAATTAATATCCGGGTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D23925g_CDS-001

Protein length: 950 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D23925g_CDS-001 MTPTTPILSLASNPMGKIDAWNPESLASLWTVFSKCAESLENGRRLENLSWRLWNRELLY
CCDNSIFLVEDMTDDGNTGNNTGVNTTATTNANTNTHPSALATPNNSVQTRHTLHPQKPP
PDDLLKSLSALSVSNAEEQHRHDASQDRNDRHDRGVSPPQLSSSLSSDAISDSDFDGDAI
GELASRRVSTTSTASTHVDNQHRSALSSLHSTRSNTNRSNLASSASTPTLSTTTATPAVS
RISSPPTLRTLVNSNDTNSRPTIRRGNKSISDYRSLYRKRPSMKRKRLSPAKLHELMQLF
RPVGQEVEYWQSLRDERRKQREEEEREGDDDHGDEHDELSESSNSVGSHVHVGGGSTNDT
THVMLPREVLTKEEGKKEAATGAATAAREVSTGTGAGVGHKDKDTLSKDVTSNTSSNAHI
KSTLAPTFFARSRRSSSRHRDSFNREKPVLVAPRTAQQQQPKVSSLFRRNTSVSSGSGSS
AAALPQSSASAVADSDSYEDDESDFTDETDNDDDMEADEGARGVARELSGSGSVSGGNLR
RSDTSTSIVRGFSPSKTSVSFLGRSSEMKQHGAAGSGAGIVSAGVNGSSVNGTSITASSQ
YQQVPRQKQKMFFIESSPSESDGFGESVTKSDCSFSPLKMEPRLSGQSGHAASKSSLVDR
SVEKSVDKSVKKHVSVQSPPKLDSTKYDDYYNDDDDDSDWDSVESDGSSANEEPTFSREE
NLSGHNLVRPSLLSSMFLNNPDRLQEQIQQSKDKSRIFSKGMIPDESNSVSSKLGSMFSG
QAKRVNTYTNLSEANYIVENGGLNSDGEDIARDNASVARSLGVKSAKSAGEKDNKRPSKN
NSVADLSRFPGVGPTPATVLSATPVAVATHEPVYGSILPSDVVRHSMLASEMSQSVQKSL
MNQSELERQNLEALKRRHTSIDLKKMGEKPEWKKEADEPADFDYHARGW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG