YALI0D23903g - BUD2

Overview

Description uniprot|Q6C802 Yarrowia lipolytica YALI0D23903g BUD2 GTPase Activating Protein, putative
Locus type CDS
Gene name BUD2
Locus tag YALI0D23903g

Location

Species Yarrowia lipolytica Positions 3116106..3119576
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 3471 (nuc.)
Previous locus YALI0D23881g Next locus YALI0D23925g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D23903g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D23903gYALI0D23903g_mRNA-001YALI0D23903g_CDS-001

Nucleotide sequence

 

>YALI0D23903g
ATGACCGAACGAAAGGTGAAACCGTCGGCGTCGTCACGGTCTCTGCGTAGCGCCTTTTCG
TTCATGAGCGCCAAACGCGACACGCCCGAGCGCAGAGTGGTCTCGGGACCCCAACTCGAC
ATCTACCCCGAACACCAAAACACGTCGCAGACGACGCTGAACGCCGAAACCGACCCTCGA
CAGTCGCTGAGCGCTGGAAGTGCGTCCGCGGGATCGCGACACCACGCAAGAGCGTCCTCG
GAGTCCCACAACCCCGCCCCAGACAACCATCCCCTGTCTCTGGGCCGAACTGCATCGACC
CTCGCCACCAACTCCACCCAGGCCAAGTACCGGCCCCGGACGCGCGCCAGCTCGATTTTC
TCGCTCAACTCCATCTTCCGCGACTCACAGTCGTCCCGCAGCATCGCCTCGAGCAACAGC
ATCAGCCGCCCGTCGATCCACGAAGACCCAGCAGCAGTCCCCCAAGACGCCCAGTCAGCA
GAGTACACTCGCAAAATCAAATCACACATTGCCAACGACAAGGGCATTCTCAAGGGCAAG
GTTGGATGGCGACGCGGAGTGGATCCGCGCAGCGGCTGGACCCAGGGAACCGTTTGGATC
TCGGACGAGAGTCTCTGTGGAGCATCTCCCGAGTCGCGGCTCACCGAAACCCTGATCCAG
GACCTCAGATCCATCAGACTCAACGCCAACAAACAGACATCAGTGATTGACATTGCAGCC
ATCAACGGAAACGAGCGGGTGTCCTTGCAGCTGGACTCTACGGACGGCCTGCTTCGGTGG
ATCGCAGCTCTATCGGTATGGATGTGTCTGGCGGGTACAGGCATTGAGAGCAAGCGAATC
CAGCCAAAGGTGGTACCGGACACCTGTACTGGCCAGGATCCGATCCTCAGCTGCTCTCTG
CAGGTCATGGGCAAAATCGTTAAGAACAAACGGCTAAGTCGGAGCATTTTCAAAGCTTCT
CCTACCATGCTGCCTCAATCTTTGCAGGCCCCTACATCATGGGTCACTGCCCAGGCCAAA
TTGCGGCCGAATGGAGCATTGGATTTCACCACAGAGGACCAGACGTACTCGTTTTCAACG
TCGTTGGCGGAGTTGACGCGCCAAGATGCATGGAGAATCCACTGGAGCGTGTTCCAGAAG
CACCACGTGCTGTATCTCGGCTCGTTACGAAAGGAGGACGAAAAGGTGGTTAAACTAGAC
ATTTTTGCACTAGGCTCGTCGCCTCAAAAGATTAGAAGACCCATAGACCAGCTCACAGGA
ATCTATCTGGCATTCCCATCCGAACACGAGTACAAGAGGTGGCTGTATGTGCTGGGGAAC
ACGCTTAGACCGACGTACTACGCGCTGGCGTCCCGTTCCTTCTCACAGACGCTCCGTTCA
GCCTCCCGTCTGGATATGAGACTTTTGCATGCTCGATACAAGCCCGCCCAGAAGGGTACA
GGTCACGTGCCGCCTCCCACATCCTTCTTTGAGCTCTCGTCTCGCGGTATCTTACTAGGA
AGGTCTTGTCTCGGTCGAAATTCACGAGATCCATTTTTCCGCGACGATTTCGTGCTGGAT
TCGGTTGCCGATGTGCTCCCCCTTGAGCTGGACTGTCGGTTTGTGAACTTTGACGACCAG
CCGTTGGTTGGACGGGTCCGAATCACCCGGGAGCTCGTTCAGGGTCCTGCAGTGGAACAA
TGGGTCAAAATATATGACGTCAACGACGGGTCCACTCTGGGCGACGTGTGCATCAAAATC
TCGTATTTCGGCTCGAACGTGTTGGCGCCCCATCAGTACGAGCATCTCGAGGCTATGCTC
AAGGACACAGATTCACGGTTGTCGGCCAAGATCTCCGAGGCCCGAATGTCGTTGCCTGAA
TACACGGACATGTTTGTCAAGATCTACTCGTGTCTTGGAATTTGCGATCAATGGCTCATG
TCGTTGATTGATGGTGAGATTGGTAAGCTGGCGGACAAAGTGACTGCCAACGACCGATCC
AAACAGGTGTCCAACTTGTTGTTCCGGGGCAACACGCTCATGACCAAGGCGATTGAGAAG
TACATGCAATTGACTGCCCACTCTTACTTGAGGGATTTGGTTGGAAAAGTTGTCCGGCAG
GTTCTTGATCGCGACGAGAAGCTAGAGCTGGACCCTTCACGGCTCGACGATGGCCATGGA
ATCACCCCCGAGATTGAGCAGCTCAAGGTGCACAACCAGGAGCGACTCATGGCGCACGCA
GAGACAATCTGGGTGAATATTCGCAACACCATTGCCGATATTCCCCAGTCTTTGGTCGTT
GTCTTCCAGTATTTGAGACAACAGCTGGAGGGACTCCATCAAGATGAGGAGGTTGTCTTC
AACGGCATTTCTGGGTTTCTGTTCCTCCGGTTTATTTGCCCGGCTCTTCTGTCCCCAAAA
CTGTTTGGGTTGGTGCACAATTCCCCTCAGCCCGAAGTTCAGCGTACGTTGACTCTGCTG
GCAAAACTGATGCAGAGTTTTGCGAATCGAGCCAATTTCACCGCCAAGGAGTCTTTCATG
ATCCCCCTTACGCCCTTTATTGAGAACAATAAGAAGGAGTTGTGTCAGTACTTCCGGGTG
ATTTCCAACCAGAACAAGTGGGACGAGATCCGTATGGCCAAGCCTTCCAAGCCCCAGTAC
AAGTACCAGCAGCACGATATCCCCCTGCGGCCTCTCCCTGATGCACCAACACTGCCGTAT
CTTTACGACAAGTACGCCTGTTACCAGGAGTTGGTTGAGCACTGGCTCACCACCGTGCCC
ACGTCCAGGGTTAACGGAGTAGGCTCTCCGATCATTGCTCGGGCCATTGGAGACAAGGGT
GGTCTTTATCAGATCAACTCGCTCGAGTTTGAGCACACTACCGACTCGTTTGGCCAGGAT
CTTAAGGCTTTGGTAGGCTCTGACTCGCCCAAGCTCGGTGGAAACGCGTTTGGGTCCGCT
TCTACCGTCGACCCAGTCATTGAGGCGTTCCATAACGAGTGTCTGCGCATCTACACAGCA
AAGACTGATCTGGAGGATGATCTGTGTAAAGCAGAGTCTCCCCTCACGATGGAGAAGCAG
GGCTGGAGCCGATTTGTGAGCCGTATCCATGTCAAGTGGGACTATGGACTCACTGGCCAC
GTGGACGCCGTCAACCCCATGACCATTGATGTGGGTGTTATCGACGACGACGACGACGAC
GACGACGATGGGGCGACCGCTACGGCGACCAAGCGGGCCAGTGTCCAGTCTGTGGGAAAC
GGGACCGGTAAGCGAGCATCTGTGCAGAGCAATGCCACTGGAATGCGACCCAGCAGTGTG
GCGTCCGTGGCCAGTATCAAGCTGCTGAACGTCAGAGGAAGTATGGTGTTGGATGACGAC
GACAGGGGGAGTATGAGTCGGAGTGAGAGCAAACTGGGCAAGTGGTTGAAGAAGAAGTAA
TTTATTCAAAAGTGCGAAATTGCATGCAATTTCGAGCGGCTATTAGACTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D23903g_CDS-001

Protein length: 1140 aa.
Product: GTPase Activating Protein, putative
Gene: BUD2

>YALI0D23903g_CDS-001 MTERKVKPSASSRSLRSAFSFMSAKRDTPERRVVSGPQLDIYPEHQNTSQTTLNAETDPR
QSLSAGSASAGSRHHARASSESHNPAPDNHPLSLGRTASTLATNSTQAKYRPRTRASSIF
SLNSIFRDSQSSRSIASSNSISRPSIHEDPAAVPQDAQSAEYTRKIKSHIANDKGILKGK
VGWRRGVDPRSGWTQGTVWISDESLCGASPESRLTETLIQDLRSIRLNANKQTSVIDIAA
INGNERVSLQLDSTDGLLRWIAALSVWMCLAGTGIESKRIQPKVVPDTCTGQDPILSCSL
QVMGKIVKNKRLSRSIFKASPTMLPQSLQAPTSWVTAQAKLRPNGALDFTTEDQTYSFST
SLAELTRQDAWRIHWSVFQKHHVLYLGSLRKEDEKVVKLDIFALGSSPQKIRRPIDQLTG
IYLAFPSEHEYKRWLYVLGNTLRPTYYALASRSFSQTLRSASRLDMRLLHARYKPAQKGT
GHVPPPTSFFELSSRGILLGRSCLGRNSRDPFFRDDFVLDSVADVLPLELDCRFVNFDDQ
PLVGRVRITRELVQGPAVEQWVKIYDVNDGSTLGDVCIKISYFGSNVLAPHQYEHLEAML
KDTDSRLSAKISEARMSLPEYTDMFVKIYSCLGICDQWLMSLIDGEIGKLADKVTANDRS
KQVSNLLFRGNTLMTKAIEKYMQLTAHSYLRDLVGKVVRQVLDRDEKLELDPSRLDDGHG
ITPEIEQLKVHNQERLMAHAETIWVNIRNTIADIPQSLVVVFQYLRQQLEGLHQDEEVVF
NGISGFLFLRFICPALLSPKLFGLVHNSPQPEVQRTLTLLAKLMQSFANRANFTAKESFM
IPLTPFIENNKKELCQYFRVISNQNKWDEIRMAKPSKPQYKYQQHDIPLRPLPDAPTLPY
LYDKYACYQELVEHWLTTVPTSRVNGVGSPIIARAIGDKGGLYQINSLEFEHTTDSFGQD
LKALVGSDSPKLGGNAFGSASTVDPVIEAFHNECLRIYTAKTDLEDDLCKAESPLTMEKQ
GWSRFVSRIHVKWDYGLTGHVDAVNPMTIDVGVIDDDDDDDDDGATATATKRASVQSVGN
GTGKRASVQSNATGMRPSSVASVASIKLLNVRGSMVLDDDDRGSMSRSESKLGKWLKKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG