YALI0D23705g

Overview

Description similar to uniprot|P15303 Saccharomyces cerevisiae YPR181c SEC23 component of COPII coat of ER-golgi vesicles
Locus type CDS
Locus tag YALI0D23705g

Location

Species Yarrowia lipolytica Positions 3081560..3083960
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2401 (nuc.)
Previous locus YALI0D23683g Next locus YALI0D23727g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D23705g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D23705gYALI0D23705g_mRNA-001YALI0D23705g_CDS-001

Nucleotide sequence

 

>YALI0D23705g
ATGGAACTATTCGAACAATTCGAGGAACAGGACGGCGTGCGGTTCAACTGGAACGTGTTC
CCGTCGACGTCACGTGACGCCAAAGATGTCGTGCTGCCCATTTCGTGCGTGTACAACCCT
CGACACAAGGCCCAGACGGTGCCGGTGGTGCAAGACACCATTGCCATCTGTGGCAACAAG
GATTGTGGTTCGATCCTCAATCCCTACTGTCATGTGGACCTGGCCAGCCAGACGTGGACC
TGCCGGTTGTGCATGTCTCGAAACCGGCTCATGAGCTCGGTGGCGGGTCAACTTCCCCCT
GCATGTGATCCGGCCAACTCGACCGTGGAGTACAACACTGCTCGCACCGCAGCAACTCCT
CCGGCGTTCCTGTTTGTGCTCGATACCAACGCCGAGCCCGAGGAACTCGAATCGCTCAAA
GATTCGCTGACCCAGGTCATTGATCAGCTCCCTGAACACTGCATTGTGGGTCTCTTGTCG
TTCGGATCGTCGGTGCAGTTCTACCAGCTGGGCTACCCCCACTGTCTCCGGTCGCTCGTG
TTCAACGGAGCCAAGAGCTATGCAGCCAAGGAGATTGAAGAAGCGTTTGGATACAATGGA
GGGGTGCCGGGAAACCGGCGCATGGAGATCACCAACCAGTTTCTGATCCCCCAGACAGAG
TCTTTCGCCATTGTCGACGCTCTGCAGCAGATCAAGGCCAACAAGATTGGACCCAAGGAG
GGAGATCGATTTGCCCGAGGCACAGGCACTGCCATCAACGTGGCTCTGTCGTTTGCGGAA
ACTGCTCTCAACCAGGGCTTTGTGCGAATCGGCGTGTTTACTGCTGGCCCAGCTACCATT
GGACCCGGCAAGATTGTCGACATGCCTCTCAAGGAGCCCATTCGAGGCCATCACGACATC
CAAAACGGCTCAGCTCTGCACCACAAGGCTGCTGCAAAGTACTACGGCGAGCTGGGCACT
CGAGCAGCTGCCGGAGGCTTTGCCGTCGACCTGATTGTGGGTTCCTACGACCAGGTCGGA
GTGGCTGAAATTGGTACTCTGTCCCACCAGACTGGAGGAGTCATCATTCTCTCAGACTCC
TTCACCACTTCCATCTGCAAAGAGTCCATTCGACGTCATTACTCGTTTGGAGACGAGAAC
GTTGGCATGGCCCACGCTGGAGCTCGTGCTGTGGTCGAGGTCAAGACCAGCAGTGAGCTC
AAGTGCCAGGGAATGATTGGCCATGGAGTGTCTCTGGCCAAACGGTCCAAGGCGTTTGCT
TCGGAGGACAAGTACATTGGCATTGGTCAGACGTGCGCCTGGTCTCTGGCATCCATCTCT
CCCAAGTCAAACTACTGCTTTTACTTTCTGAACACCGCTGAGACCCCCACCCTGCCGCCT
TCAAACCAGTCTGTTGCCACGGGCGTGATTCAGATCATCACCCACTATCTTCACCCCTCT
GGAGTGTTCCGGGTTCGAGTGTCGACGCTGGCTCGAAACTTTGGCCCTGCCCATGGTCTT
CTTCCCTATTTCGATCAGGAGGCAGCTGCCACAGCCGTTTCACGTGAAACTGCGTTCCGA
ATGCAGCATGGCGAGTCAGCTGACGATACCATCCGATGGCTGGACACGGTTCTGGTCAAG
TTCTGCAACAAGTTTGGCGAGTTCCGAAAGGGCGACACACGGTCGTTCATACTGCCTCCA
AACTGCACCATGCTGCCTCAGTTTCTGTTCCATTTGCGACGGTCGCAGTTTGTGCAGACC
TTCAACAACTCGCCTGATGAGACCGCGTACTACTGGCACTACCTGCTGGCCGAAAACGTG
TACTCTACAATTGTCATGATCAACCCTGCGCTTCTGGCGTTTGAGCTGGACGCACCGGAG
GGTATTCCCGTTCTTCTAGATTCGATTTCTGTCACTTCTGAGCGAATCCTTTTGCTGGAC
ACCTTCTTCCATGTCATTATTTTCCATGGAGAGACAGTTGCGGCGTGGAGAAACGCCGGG
TACCATGAGCAGGAAGAGTACGGCAACATTGCCGAGCTGCTGGATGCGCCCAAGGAGGAA
GTGCGGGAGCTGCTCAGTGATCGGTTCCCTCTGCCTCGATACATTAACTGTGACCAGGGC
GGTTCTCAGGCGCGATTTTTGCTTGCTAAGCTGAATCCTACTACGCAGAGCATGGACATG
GCTGGAGCTGCTCCGGGCACGGTGGTGTTGACTGATGACGCGTCGTTGCAGACGTTTATG
GAGAGTTTGTGCAAGTTGGCGATGAACCTATAATATCGAGCGTAGCGAGTTATTATAGAA
TGGAACAACTGTGAGTCCAACCTATGGCAGTACCTAGTTGGAGATCATCGTGCGTTAGTC
ATTGGTAATAGGTGGATGTATGTAATGTATAGATAGATGGATATGGAGAATTCTTGGTGC
A

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D23705g_CDS-001

Protein length: 751 aa.
Product: GTPase-activating protein, stimulates the GTPase activity of Sar1p, putative

>YALI0D23705g_CDS-001 MELFEQFEEQDGVRFNWNVFPSTSRDAKDVVLPISCVYNPRHKAQTVPVVQDTIAICGNK
DCGSILNPYCHVDLASQTWTCRLCMSRNRLMSSVAGQLPPACDPANSTVEYNTARTAATP
PAFLFVLDTNAEPEELESLKDSLTQVIDQLPEHCIVGLLSFGSSVQFYQLGYPHCLRSLV
FNGAKSYAAKEIEEAFGYNGGVPGNRRMEITNQFLIPQTESFAIVDALQQIKANKIGPKE
GDRFARGTGTAINVALSFAETALNQGFVRIGVFTAGPATIGPGKIVDMPLKEPIRGHHDI
QNGSALHHKAAAKYYGELGTRAAAGGFAVDLIVGSYDQVGVAEIGTLSHQTGGVIILSDS
FTTSICKESIRRHYSFGDENVGMAHAGARAVVEVKTSSELKCQGMIGHGVSLAKRSKAFA
SEDKYIGIGQTCAWSLASISPKSNYCFYFLNTAETPTLPPSNQSVATGVIQIITHYLHPS
GVFRVRVSTLARNFGPAHGLLPYFDQEAAATAVSRETAFRMQHGESADDTIRWLDTVLVK
FCNKFGEFRKGDTRSFILPPNCTMLPQFLFHLRRSQFVQTFNNSPDETAYYWHYLLAENV
YSTIVMINPALLAFELDAPEGIPVLLDSISVTSERILLLDTFFHVIIFHGETVAAWRNAG
YHEQEEYGNIAELLDAPKEEVRELLSDRFPLPRYINCDQGGSQARFLLAKLNPTTQSMDM
AGAAPGTVVLTDDASLQTFMESLCKLAMNL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG