YALI0D23683g - LAT1

Overview

Description uniprot|Q6C812 Yarrowia lipolytica YALI0D23683g LAT1 Dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex
Locus type CDS
Gene name LAT1
Locus tag YALI0D23683g

Location

Species Yarrowia lipolytica Positions 3078039..3080546
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2508 (nuc.)
Previous locus YALI0D23661g Next locus YALI0D23705g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D23683g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D23683gYALI0D23683g_mRNA-001YALI0D23683g_CDS-001

Nucleotide sequence

 

>YALI0D23683g
ATGTCTGCCCGATTTCTTGCAACTCGATTGGTTCGAGTGAGGTGAGTATGGTGAAGAGCC
AGAGGCACGGATGGAGTAGCGAGCGGACCCCGACAATGGGTTGCTGACGTCCTCCAAGAC
CAGTGCAATGGTGATGCGAAACCGACTGTCGTGTGTTTTGTGTGGTGTGGTGGGAGGGTG
CTTGTGATTGTGTTTGTGTTTACAGTGGCGTGGCAGTGATAGAATGGTCCGCACAACTGC
TAAACCAGGCTGGTCAGATGAGCGGGCTCCATGGACTCGCCCTTGCCTCGTCACCAGTAC
TGGTAGTACGGACATGCACCGATCATCATCGGAGAAGCGTGAAAAACGAGGAGACGCCAA
CGATAAGAGCCTTTCAACGAATCCTCTTGTCTGTTCCCCCGATGACTCCTTTTGATAGGT
GTGTCTCCATGTCATTTTCTCATTGCTGTGCTTAACTCCGGTGGTGCCTCAACACTCCAA
CAGCCACAATGATCACAGATGCAATTGACCCGGAACGGGTGAGGGGAATAACGTGATGAT
TCAAGAAAGTATACCGCAAAGTCCGATTGTCGAGTTTGACAACTAAATTCCATGGCCGAG
CTCGGTGGTGTTCTTTGTTATTGCCACCATACAATCATTTATCATTTGCAAGCTACACCC
AGCAACAGTTACCCACGCACTGGTTACTCTATCAAAGCGTCACTTGCACCTCTGAGATCC
GCCGTGAACGACATTGTCGCTTCCCACCCAAAAATTCGTTGTATCACACCTGCACATCCC
ACACCTACAGAGGACAGCAGTTAGGCAACCCAGCTCAAGGCAACACAAGTACAAAGTCCA
TGGAATGGTCGTGTTGATAGTGATGTTGTCGCCTCGAGTCAGTTACGCAATTGCTATTTG
TGTGGCTCCCTCAAACAGAGCACTGTTGTACACTTTTGGAATCCGCCGGTGGCTACCTGG
TCCACCGGCACGTTCAGTCACTTGTTTGTGTTTGCTCAATCCTTTCGCTCCAGCGCTAAC
CCAGACCAACATTCTCTTCCTTCTCTCTCCCCACCCTCACCCGATGCTACGCCGCCAAGT
CCTGGCCTAGCCACACAGTCATCGACATGCCCGCCCTGTCCCCTACCATGACCCAGGGTA
ACATTGGCGCCTGGCAAAAGTCTGTCGGCGACGCTCTTGCTCCCGGCGAGGTTCTCGTCG
AGATTGAGACTGACAAGGCCCAGATGGACTTTGAGTTCCAGGATGATGGCTACCTGGCCA
AGATTCTGCTCGACGCCGGAGCCAAGGACATTGCCGTTGGCACCCCCATTGGTGTCTACG
TCGAGGACGAGGCCGACGTGGCTGCCTTCAAGGACTTCACCATTGACGACGCCGGAGGAG
TCCCCAAGCCTCCCAAGACCGAGGAGCAGAAGGAAGAGGAGGAATACGAGGCCGAGAAGG
CCGAGAAGGCCGAGAAGGAGGCCGAGGCTTCCAAGGAGACTGCTTCTCCCGCCCCCTCTT
CTCAGTCCTCTGCCCCTGCTGCCCCCACTCCCCCCTCTTCTCGAATCTTTGCTTCTCCCA
TGGCCAAGACCATTGCTCTGGAGAAGGGCATCAAGCTTAGCGAGATCAAGGGCTCCGGTC
CCGGTGGTCGAATCATCAAGCGAGACGTCGAGAACTGGACCCCTCCCGCCGCTCCCGCCG
CCAAGGCTGCCCCTGCCAAGGGCGCTGCCCCTGCTGCTGCCGCTGCTGCTGGATCTGCTT
ACACCGACATTCCTCTCACCAACATGCGAAAGACAATTGCTTCTCGACTGACCCAGTCCA
AGAACACATCTCCCGACTACATTGTGTCTTCCACCGTGTCTGTGTCCAAGCTGCTCAAGC
TGCGAGCTGCTCTCAACGCCTCCTCCGATGGTACCTACAAGCTGTCCATCAACGATCTGC
TTGTCAAGGCCCTGGCCGTGGCCAACACCAAGGTCCCCCAGGTCAACTCCCAGTGGCTCG
AGTCTGAGGGTGTTATTCGACAGTTCACCAACGTGGACGTTTCTGTCGCCGTTGCCACCC
CCACTGGTCTGATCACCCCTGTGGTCAAGAACGCCAACCTCAAGGGTCTGGCGGAAATCT
CCAAGGAGATTAAGGCTCTGGGCAAGAAGGCCAAGGACGGCAAGCTGGCTCCCGAAGAGT
ACCAGGGCGGTACCGTGACCATTTCCAACCTGGGCATGAACCACGCCGTGTCCTTCTTCA
CTGCCATCATCAACCCTCCCCAGGCCGCCATTCTCGCTGTCGGCACCACCGAGCGAAAGG
CCATTGAGGACGTTGACTCCGAGGCCGGCTTTGTCTTTGACGACGTTGTTACTCTGACCA
CCTCTTTCGACCACCGAGTCGTCGATGGAGCTGTTGGAGGCGAGTGGGTCAAGGCTCTCA
AGCAGGTGGTTGAAAACCCCATTGAGATGTTGTTGTAGGATGATTAATAGATTGTAATTA
GCAGAATGTGAACTCTGTGCGAGAAGTAGTCGCTAGTGTGACCGTTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D23683g_CDS-001

Protein length: 485 aa.
Product: Dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex
Gene: LAT1

>YALI0D23683g_CDS-001 MSARFLATRLVRVRPTFSSFSLPTLTRCYAAKSWPSHTVIDMPALSPTMTQGNIGAWQKS
VGDALAPGEVLVEIETDKAQMDFEFQDDGYLAKILLDAGAKDIAVGTPIGVYVEDEADVA
AFKDFTIDDAGGVPKPPKTEEQKEEEEYEAEKAEKAEKEAEASKETASPAPSSQSSAPAA
PTPPSSRIFASPMAKTIALEKGIKLSEIKGSGPGGRIIKRDVENWTPPAAPAAKAAPAKG
AAPAAAAAAGSAYTDIPLTNMRKTIASRLTQSKNTSPDYIVSSTVSVSKLLKLRAALNAS
SDGTYKLSINDLLVKALAVANTKVPQVNSQWLESEGVIRQFTNVDVSVAVATPTGLITPV
VKNANLKGLAEISKEIKALGKKAKDGKLAPEEYQGGTVTISNLGMNHAVSFFTAIINPPQ
AAILAVGTTERKAIEDVDSEAGFVFDDVVTLTTSFDHRVVDGAVGGEWVKALKQVVENPI
EMLL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG