YALI0D23375g

Overview

Description weakly similar to uniprot|P40567 Saccharomyces cerevisiae YIR009w MSL1 U2 snRNA-associated protein with similarity to U2B
Locus type CDS
Locus tag YALI0D23375g

Location

Species Yarrowia lipolytica Positions 3039192..3039894
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 703 (nuc.)
Previous locus YALI0D23353g Next locus YALI0D23386g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D23375g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D23375gYALI0D23375g_mRNA-001YALI0D23375g_CDS-001

Nucleotide sequence

 

>YALI0D23375g
ATGGGCAAGACCAAACGAGAATCGGCTCTTGTGGAGAGCAAGCGGCCTGCGAAAAAGTCC
AAGACCGATGGCGACGAACCCACCCCATCGCCAACGCTCTACGTGAAAAACCTCACCGAC
AAATGCACTAAATCGGACCTCAAACGGTACCTGTACATGCGATTCAGCTCGTACGGACAC
ATTCTCGACATTGTGGCGATGAAAAACGAGCGGATGCGGGGCCAGGCACATGTGGTATTT
AACGATATCGATGCGTCGATCTCGGCGCTCAACGGGCTGCAGAAGAGCGAGTTCATGGGC
AAAGAGATGGTAATTGAGTATGCTCGATCCAAGTCCCATGCCATTGCCAAGTTGGACGGC
TCGTTTACCATTCCCGAACCTCCCGCATTCGAAGAGAGTGTTCTTCCGTTGGCACCTTTT
GAGGATGTCACGGCAGAGTAGCGGCAAATCGAACGCAGTGAGCATTGGACTCCTCGGGGG
CCAGTGACTCGTGGACGACTTGTGAAACATCGCAAGTCACAAGCCGCGAACCTGCTCTAT
ACAAGCTTCTTGCGACAGTCGAAACGGCAGAAGCATCTGCATCTTTCAGATCATGGGAGA
TGAAGCGGTTGGCAGGCATACTATGAGCTTGTCATGATTTCAAACCAGGGAGGATTATTT
ATTGTATAATAGAAAAGGTGCATGGCACCGGATGACGTCATGA

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0D23375g_CDS-001

Protein length: 147 aa.
Product: Conserved hypothetical protein

>YALI0D23375g_CDS-001 MGKTKRESALVESKRPAKKSKTDGDEPTPSPTLYVKNLTDKCTKSDLKRYLYMRFSSYGH
ILDIVAMKNERMRGQAHVVFNDIDASISALNGLQKSEFMGKEMVIEYARSKSHAIAKLDG
SFTIPEPPAFEESVLPLAPFEDVTAE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG