YALI0D23353g

Overview

Description similar to uniprot|P38736 Saccharomyces cerevisiae YHL031C GOS1 v-SNARE protein involved in Golgi transport
Locus type CDS
Locus tag YALI0D23353g

Location

Species Yarrowia lipolytica Positions 3037702..3038642
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 941 (nuc.)
Previous locus YALI0D23331g Next locus YALI0D23375g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D23353g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D23353gYALI0D23353g_mRNA-001YALI0D23353g_CDS-001

Nucleotide sequence

 

>YALI0D23353g
ATGGCGACCATATCGAGCTCGCGAACACAAGTGCGACGGCTAGAGTCTCAGCTTGCAGAG
CTGCTCTCGGAGTACTCCTCTTTTGCCACCTCTCACGCCATAGCAGCCTCCGAAGACGAG
GTACGGATTGGACGGGATATCGAGCAGGTAATTGAGAAGACCGCCGACTCCCTGGAGTCG
TTCGAACGTCTGCTGGATTCCACCCCTAACGCCACAGCAACACAAACAGGCCAGTTGCAA
CGCCACAGAGAGACTCTCGCAGAGCACAGATCGCAATACAAGAAGATCAACGCTGGAATC
AAGCAGGAACGAGACCGGGCCAACTTGCTGTCGTCGGTGCGGTCGGATATCGAGGGACAC
AGAAACCGAAGTGCTACTCCCCAGGCCGAGGAGGAGTACATGTTACACGAGCGAGGCCGG
GTGGACAACTCAAATAACATGACCGATACTCTGCTTGCTCAAGCGTATGCGACTCGAGAG
GAGCTGCTGACCCAGCGGGCGAGTTTGGCCAACATCCAGCGTCGGCTGTTTAACACGGCT
AGCAGCATTCCAGGCATTAACACGGTCATTTCCAAGATTAACACCCGGAAGAAGCGAGAC
AGTTTGATTCTGGCGGTTATTATCACCCTGGGTATTTTGTTCATTCTCTTCCTGAGATAG
CAACAGTAAACTTCGAACAAACGGGTTATTTTGTTGTTTTTTTCTGGGAGCATCTTGGGA
CACAACGTTCAGAGCGAGGTCTCACAGGATATGTTACAGAAGAAGCCCACGGAATTGGCC
CTGATGGAAGTTGCCTATGGACCAAGAAGTGAGCGCAACACAACAAATTGGCGCTCGCTA
AGGGTGGCGCAAACAGTAACAGTAGCTGCTAGATTCATTAGGTATGCTCTCTGCTGCTAG
AGTGAGGTGAAATAGATGAATGTATTTAACAGTAGACTAAG

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0D23353g_CDS-001

Protein length: 220 aa.
Product: v-SNARE protein involved in Golgi transport, putative

>YALI0D23353g_CDS-001 MATISSSRTQVRRLESQLAELLSEYSSFATSHAIAASEDEVRIGRDIEQVIEKTADSLES
FERLLDSTPNATATQTGQLQRHRETLAEHRSQYKKINAGIKQERDRANLLSSVRSDIEGH
RNRSATPQAEEEYMLHERGRVDNSNNMTDTLLAQAYATREELLTQRASLANIQRRLFNTA
SSIPGINTVISKINTRKKRDSLILAVIITLGILFILFLR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG