YALI0D22847g

Overview

Description similar to uniprot|P18544 Saccharomyces cerevisiae YOL140w ARG8 acetylornithine aminotransferase
Locus type CDS
Locus tag YALI0D22847g

Location

Species Yarrowia lipolytica Positions 2958160..2959608
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1449 (nuc.)
Previous locus YALI0D22825g Next locus YALI0D22869g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D22847g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D22847gYALI0D22847g_mRNA-001YALI0D22847g_CDS-001

Nucleotide sequence

 

>YALI0D22847g
ATGAACCGATTCAGCAAGATCCGACAGTATTCGACCCTGCTCCAGACGGCAGAAAAGTAC
TCGGTGCCAACCTACGCCAAACCCAGCGTGATTCTGACCAAGGGAAAGGGCGCGTACCTG
TGGGACAGCAATGACAACAAGTACATTGATTTTTCGGCCGGCATTGCCGTCACGGCTCTG
GGCCACTCCAACCCCGAAATCACAAAGATCCTGGCCGAGCAGTCGTCGCAATTGATGCAC
TGCTCCAACCTGTTCAACAACGAGTGGGCTCCCCGTCTGCAGGAGTCGCTAGTGGAGGAG
ACCCTCAAGAGCGGAGGAATGAAGGGTGCCAGAAAGGTGTTTCTGGCAAACTCCGGAACC
GAGGCAAACGAGGCTGCTCTTAAGTTTGCCCGAAAGGTCGGCACCTTGAGCTCGCCCGAT
AAGACGGAGTTTGTCAACTTTGAGAAGGCTTTCCATGGCCGAACTATGGGCGCTCTTTCC
GTGACCCCTAACCCCAAATACCAGGCTCCTTTTGCTCCTCTGGTCCCTGGAGTGAAGACC
GGCGTCTACAACGACCCCAAGGCTGCCGATCTCATCACCGAGAAGACCTGCGGAGTCATT
GTGGAGCCTGTGCAGGGCGAGGGAGGCGTGTACAAGGCCAACGACGAGTTTCTCCAGGCA
CTGCGAAACAAGTGCGATGAGGTGGGAGCCATGCTCATCTTCGACGAGATCCAGTGCGGT
CTGGGCCGAACCGGACGACTCTGGGCACACGACAAGGTGCATCCCGATATCCTTACCATG
GCCAAGGCGCTGGGCAACGGATTCCCCATTGGCGCCACCATGGTGACTGAGGCTGTGGCC
GACAAGATTGCCATTGGCGACCACGGCACCACCTACGGAGGTAACCCTCTGGCGTCTCGA
GTGGGCCACTATGTGCTGAGCCAGGTGGCCAGCAAGGAGGTGCTTGACAATGTGAAGAAG
GTGAGCCAGCAGATTCGAGACGCAGTTGCCGAGGTCCAGGAGGAGTTCCCTGAGCTCATC
ACCGAGGTGCGAGGAGACGGTCTGCTGCTCGGAATCCAGTTCAGCAAGGATCCTTCCAAG
GTTGTTGCTGCTGCTAGAGAGAATGGTCTTCTTGTCATCACCGCCGGAACTAACACCGTT
CGACTGGTCCCTGCGCTTAACATTGACCAGGAGGCGGTTACCGAGGGTCTGGAGATTCTC
AAGAAGGCGATCCGAGACAATGCCAAGGACTTGTAAGCCACTTTAGGAGGTGGTGGTCGC
AAGGCCGACTAGGCTAATGAGGAGAAAAAATCATCCTCCTCTACACCCAGGACTACTGAG
TTGACATTCTCTGCGGACACGAGGGATCAGCGTGGTCATGAAAGGGGTCCAAAAGCTCAC
CTGTCTCCAGTCTGGTTCTCAGCCCCATATAGAAAGTAATACGTGAATGAAAATTGTTCC
GAGATTGGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D22847g_CDS-001

Protein length: 412 aa.
Product: Acetylornithine aminotransferase, putative

>YALI0D22847g_CDS-001 MNRFSKIRQYSTLLQTAEKYSVPTYAKPSVILTKGKGAYLWDSNDNKYIDFSAGIAVTAL
GHSNPEITKILAEQSSQLMHCSNLFNNEWAPRLQESLVEETLKSGGMKGARKVFLANSGT
EANEAALKFARKVGTLSSPDKTEFVNFEKAFHGRTMGALSVTPNPKYQAPFAPLVPGVKT
GVYNDPKAADLITEKTCGVIVEPVQGEGGVYKANDEFLQALRNKCDEVGAMLIFDEIQCG
LGRTGRLWAHDKVHPDILTMAKALGNGFPIGATMVTEAVADKIAIGDHGTTYGGNPLASR
VGHYVLSQVASKEVLDNVKKVSQQIRDAVAEVQEEFPELITEVRGDGLLLGIQFSKDPSK
VVAAARENGLLVITAGTNTVRLVPALNIDQEAVTEGLEILKKAIRDNAKDL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG