YALI0D22572g

Overview

Description similar to uniprot|O14164 Schizosaccharomyces pombe Probable eukaryotic translation initiation factor 3 93 kDa subunit (eIF3 p93)
Locus type CDS
Locus tag YALI0D22572g

Location

Species Yarrowia lipolytica Positions 2896073..2898695
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2623 (nuc.)
Previous locus YALI0D22561t Next locus YALI0D22594g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D22572g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D22572gYALI0D22572g_mRNA-001YALI0D22572g_CDS-001

Nucleotide sequence

 

>YALI0D22572g
ATGTCCCGATTTTTTGCTGGTGGCTCCGACAGCGACGACTCGTCTTCGGACGAGGATCTG
TACGGCTCTGGCTCCGAGTCCGGCTCCGACTTTTCCCAGGACGAGCAGGACGGAGGAGAT
GATAACGACGATGACATGAGTGACGATTCCATGTTTGCTGACGACTCTGACGACGACAGC
GACGACGACGAGGACCTGGGCGGCAAGGGCGCATCTTACTTCCTCAAGTCGTCCACCGTG
GCCGACTCGGACGATGAGGAGGATACCGGTAAGAAGACGGTGCTGTCTGCCAAGGACAAG
CTGCTTGCCGAGCTGGCCAACTGCTCCAAGCTGATTGACAACGGCAAGCGAATCAACGAC
TGGGTGTTGATCCAGGGCGAGTTTGACAAGCTCAACAAGGCCATGGAGCGGTTCACCAAG
CAGCGACATGGCCTGCCCCCCAAGGTCTACATCCAGTGCATTGTTGAGCTGGAGGAGTTC
CTCAACACCCAGCTGGAGGACAAGGCTGGAATCAAGAAGATGAACGCGTCCAATTCGCGA
GCATTCAACACCGTCAAGCAGCGGGTGCGAAAGAACAACAAGGAGTACGAGGCTGCCATC
GCAAAGTACAGCAGTGGTGGTGACGTGGCAGAGGAAGAGGAGGAAGAGAACAAGGAGGAC
AAGCCCAAACCCCGGGCCAAGGATGAGTTTGTGCTCACCGCTCCCTCCCAGGCTTCCAAT
GAGGAGTTCACCACCGTTGGCAAGGCTGGAAAGGCTCTTGTGTCCCCCACCGACATGTTC
AAGACTCTCAAGACCGTTCTGGAGAGCCGAGGTAAGAAGAACACCGACCGGGAAGACCAG
GTGCGACAGCTGGAGAACCTGCTGCCATCTGCCTCTACCGTCTACCAGAAGATCTCTGTC
TACACCATGCTTGTGTCTACTCGTCTGGATCTGTCTTCTGCGTCTGCTGCTCTTGCTCCC
GAGAACTGGCTCAAGGTTGTGGGCGACCTCAACGACCTGCTGTCTATTCTCGAGGAGAAC
ATTGATACCTATCACGTGATTGAGACTGCCCCCGAGATTGAGGACGTTGAGAAGGGCCCC
GTTGCCCGGGAAGACGGCGTCAAGCTCATTCCCGGCTCTGTGGCTTCTCTGGTTGAGCGT
GTGGACGACGAGTTCACCAAGGCCCTCCAGTTCATGGACCCTCACACTACCGAGTACGTG
GACCGTCTGAGAGACGAGACCAAGCTGTACCAGACTCTCCTCCGAGTGCAGATGTACATT
GAGCATGTCTCCGACGAGAAGGACACTCTTGGCCTCGCTCGAATCCTGGTTCGACGAGTC
GACCATCTCTACTTCAAGCCCAACAATGTCATCAACATGACTGAGCAGATTGCCTGGGGT
GGAGTCAAGGGCGATTCCAAGGCCACTCCTCGACCTACAGAGAAGGACCTCACCTCATCC
ACTTACCCCACCACGCTCATTTCGAACATGTGCTCCGTTCTGTACAAGCAAAGCAACACT
GTGTTCCGAACAAAGGCCATGCTGGCTCACGTCTACCACTACGCTCTGAACGACGAGTAC
TACAAGGCACGAGATATGTTCCTCATGTCCCATCTGCAGTCGTCCATTGCCTCTGCTGAG
CCCCAGCTGCAGGTGCTATTCAACCGAACCCTGGTGCAGCTTGGTCTGTGTGCTTTCCGA
AGCGGACTCATTGCCGAGGCCCAGCAGTCGCTCCAGGAGGTCTGCTCTTCTCCTCGACTA
AAGGAGCTGCTCGGACAGGGTCTGGCGAAGTACGCCCAGGCCGGAGTTGTCGACAAGCAG
CGAGTGCTGCCCTTCCACACCCACATCAACCTCGAGCTGCTGGAGTGCGTGTTCCTGTGC
TCGTCGTTGCTTATGGAGATCCCCTTTATGGCTGCCCACAACACGTCTATCGACGCTAAA
AAGAAGGTCATTTCCAAGCTGTTCCGACGAATGCTCGACTACCACGAGCGACAGGTCTTC
TGTGGCCCTCCCGAAAACACCCGAGACCACATTATGCAGGCTGCCAAGGCTCTGCAGCGA
GGCGACTGGGAGGCTGCACGAGATCTGGTCTGTGCCATCAAGATCTGGAGCCTGCTCCCC
AACCCCGAGGCTATCAAGGCTATGCTCACTGACAAGCTCCAGATTGAGGGTCTGAGAACC
TATCTGTTCACCTACTGGAACCACTACTCAACGCTGTCTCTGAGCACTCTGGCCGACATG
TTCCAGCTGCCCGTTAAGGATGTGGCTGCCATTGTCGCCAAGATGATTGCCCAGGAGGAG
CTTCCTGGATCTCTTGACCAGAAGACCAACTCGGTCGTGTTCACACAGGCTGTCCAGCAG
ACCAAGCTGCAGCAGCTCGCCGTGGCACTGTCTGACAAGGTCATCCAGCTGGCCGAGCGA
AACGAGCGGCTCGTGGCTGGCGGGTACCAGTTTGACAAGATGACCCAGCCCCAGAAGAGA
AAGACGCAGAGAGCTCGATAGGCGAGGGAGTTATCTGAAAACACGAGCGCAAGTGAGTGT
GCAAAAATGACAGCAAGAGAGTGCTGAATAGTTGAATAGAGCATGTTATAGGAGTTCCAA
AGTTCTGAGTGAGTGCTTTGATGGACATTTAGTAGACTTTGGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D22572g_CDS-001

Protein length: 827 aa.
Product: Translation initiation factor 3 93 kDa subunit (eIF3 p93), putative

>YALI0D22572g_CDS-001 MSRFFAGGSDSDDSSSDEDLYGSGSESGSDFSQDEQDGGDDNDDDMSDDSMFADDSDDDS
DDDEDLGGKGASYFLKSSTVADSDDEEDTGKKTVLSAKDKLLAELANCSKLIDNGKRIND
WVLIQGEFDKLNKAMERFTKQRHGLPPKVYIQCIVELEEFLNTQLEDKAGIKKMNASNSR
AFNTVKQRVRKNNKEYEAAIAKYSSGGDVAEEEEEENKEDKPKPRAKDEFVLTAPSQASN
EEFTTVGKAGKALVSPTDMFKTLKTVLESRGKKNTDREDQVRQLENLLPSASTVYQKISV
YTMLVSTRLDLSSASAALAPENWLKVVGDLNDLLSILEENIDTYHVIETAPEIEDVEKGP
VAREDGVKLIPGSVASLVERVDDEFTKALQFMDPHTTEYVDRLRDETKLYQTLLRVQMYI
EHVSDEKDTLGLARILVRRVDHLYFKPNNVINMTEQIAWGGVKGDSKATPRPTEKDLTSS
TYPTTLISNMCSVLYKQSNTVFRTKAMLAHVYHYALNDEYYKARDMFLMSHLQSSIASAE
PQLQVLFNRTLVQLGLCAFRSGLIAEAQQSLQEVCSSPRLKELLGQGLAKYAQAGVVDKQ
RVLPFHTHINLELLECVFLCSSLLMEIPFMAAHNTSIDAKKKVISKLFRRMLDYHERQVF
CGPPENTRDHIMQAAKALQRGDWEAARDLVCAIKIWSLLPNPEAIKAMLTDKLQIEGLRT
YLFTYWNHYSTLSLSTLADMFQLPVKDVAAIVAKMIAQEELPGSLDQKTNSVVFTQAVQQ
TKLQQLAVALSDKVIQLAERNERLVAGGYQFDKMTQPQKRKTQRAR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG