YALI0D22506g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D22506g

Location

Species Yarrowia lipolytica Positions 2874580..2879280
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 4701 (nuc.)
Previous locus YALI0D22484g Next locus YALI0D22520g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D22506g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D22506gYALI0D22506g_mRNA-001YALI0D22506g_CDS-001

Nucleotide sequence

 

>YALI0D22506g
ATGAGACGCGTGGATTTCAGTCCGTACGTGGCCGAGCTGCGTGCGAGCGCGCCACATCCG
CCCAAAATCGCACACGTGACCTCCGGGGTCTCGTTCCACAAGCTCCACGCCGCGCTCAAC
CAGTTTGCCAAAACGTACCATTATGTGTTTGATGCTTCCAAGCCGCGGCGCAAGGACGAC
ATGGAGTGTGTGGTGATGAAGTGCTGTCGCAGAAGGTGCAGGTACAGGCTTTCGGTGTTT
TCCGAGGCTTCCAACGCTGTCGACGGCGCTCTATCGTGGCTGGAGTATGATTCGGATGAC
ATGGTGGAACATAATCACGAGCTGGACGGCTCCGATTTGACCGACGAGGATCGCAAACGG
ATGAAGAGAGTGGAATTTAAACGAAAGAGGAATGCCAAGCGGGTGCAGCAAGTAGAAGAC
AGTGATACCCGAACTAAAGAGAGCCATAGTGGTGATCTGAGACATGGCTGTGACGATGAA
CTCAACGGGTTCAACGACCTCAACGGTTTTGTCGATCCCAAAGGATCTAACAGTTACGAC
TGCGACAATGGCGACGACATTATGGAAGAGGAATTTCACTCCGACGAAGAACCTCTGTTT
CTCTGCAGTGAGGCAGAGGATTCCGAGACTTCTCCTGCTCCTGAGGTGGCTGAACAACCG
CAACAGTCTCCAGTTCAACGTCTGGACAAATATCATTCTCTGTTTTTGCATAGTGAGGAA
GATGACGATGAGGTTCAGGAGATCGTCGCGACCAACAAGACCAACAAAACCAAGTCTAAG
CCAAAGAAGAAGAAAAAGATTGAAATTATTTCACTTGATTCTGATTCCGAGGAGGCGGAA
GAAGAGCGAGCTCAGAGTTCTGCGAAGACCATTTCCCCACAACCCAAGTCGGAATCCTCG
CCAGCAACTGCTTCCGGCGCCCAGAAAAAACGCGCCAAGTCGCAAACAAAGCCGTTTTCG
TCTTCAACAACCTCTTCAGAACTGTCAAAGACTTATTCTCATGAAGTTCTTGATACTCTC
AAGGCGCAGAAACGCAATCACCGTGTGTCTAAGCATCAGAAGGAGCGCGCAAGAGTAGAC
GAAATCACGGCCAAAGTGCGAGAGAACGAAAAGTTGGCCTTGGAGAATAAAAAGACGGAG
CTCGAACAACAGGTCGAAGCCACCTTGAGCAAGCGTGAGATGGTGCTGAAAACTTATTTG
AGGTTGGAAAAGGGACTCAGAGGCGCGCAATTGGCGGATTCGTTGTCTAGGATGATGAGG
GTTATAAAAACGCAGGTTCAGGATGAGCTTAGGGGTGTGCATGAGGAGGAAAATGAGCCT
GTGATGTTAGCTGAGTCATCCTTCATTGTGGACGACAAGGACGACAAAGACGAAGACGGG
GAGTACCTCGAGGAAGAGTTGGTGAAGAAGGACGGACGCAGGAAGACTTCTGGAACAAAA
AACAAGGCTCTGGAAAAGGCTCAACGGAAGAAGGAACGCAAACACGAACGGCAGGCAGCC
CTGATGAAACTTCTAGATCGGCGAGTGATGAAAGAATGGCGGGCTTGTCCGTTTTGCAAA
CGGCGTTTTTACCCCAGAGAGATAGGCAAGAAGACTAATTCGGCCGAAGCGGAGCTCATG
ACCCACATTCAGCTAGTTCATCCCGATGAGGTTGTTTACCTGGATGATCTGGAGGAGGAG
GAGGAGGAGGGGGAGGACGCAGTTCAGTCCGACCACGGTTATGGCGACTCTTTGAATTCT
TCTTCCGACTCGGAGGAGGAGATCGTGGCCGTGCCGAGGTCGAGACTGAGACCGAGACCC
AAGGTTGTGGTAGACGAGGACAGTGGAAATGAAGAAGAGCCTGCTGTTGACCCCGAAGTC
GAGCCAGGCACCACAGTTGAGTCTCCTGATGGGCCAGAGTTAGCGGAGGAAGACGCGGAG
GAAGAAGCGGAGGAAGAAGTGGAGGAAGAAGCGGAGGAAGAAGCGGAGGAAGAAGCGGAG
GAAGAAGCGGAGGAAGAAGCGGAGGAAAAAGCGGGGGAAGTGGATGGCCCGGAAGTGGGC
GAGCTAGAACCTGTCGATGATGTGGAGGTTGAAGTTGAAGCGGAGTCAGTGGCTGCTGAT
GAGATAACCTCAGAATCACCTCAACCAGTGGCTAGATCTCCCAAAGGAAAGTCTCCCGAG
CCAGCTTCTCCTGTGGGTGAGCCTATTGAAGAACCCACGATCAAGACCACCCCTGCTGCT
GAATCAGTTGATATTGTCAGAACATTGGCTGCAACTGAGAAGGCAGCTCCTGTTACTGCA
GCTTCTCCGGTCAATACTGGGTCTCCAGTAACCGCTGCATCTCCAGCCAAGGCTACTGCT
CATACCGCAACTCCTCAAGTCAAAACATCACAGACAGAACCTACAGCTACCCCAGCTGCT
ACGGTCGTTCCAGCTGTGACGTCGCCGGTTGAAGCTTCTTCTTTGGCTACCCAGCTTGCT
GCTTCCGCCGACTCCGCACCAACGCAACCACCCTCCAGCGCGAACCCCTTCTCAACGCCA
ACTAAGAGCCCTGCCAAAGCTATGGTTGTCATCAATCTCGACGATGGTGATAACGAAGAT
GACGTAGTTGTTGTGGCATCTACTAGAAGTGCGTCTTCTGCTATAGCCGCCCCTGGACCA
TCTCATTCCAATACAGCTCCTGACGGCTCGGATCTCGCGGCGCAACAAACGGCCAAACGG
AGACATAGCTCTTCCCTGCTACCTAATGTTCCGTTTCGCTACTCGCGGGACCCCGATCCA
CCTTACAAACGACAGAAGCAGGTTGCAGAGTTGCCCACTGGCGGTTTGACTATCCAAGCT
CCTGCCTATGCACATCGTGACGTCACTGCCAACTCCACTAGGCCTACAACATTTTCCAGC
GACGTTACTCCCTTTGCATCAAGTGCAGATCCCAATTCCACTGGACAGGGATCTGTCAAT
CCCCCACACTTACCAAGCCTAGGCACTAGTCCCGCTGGTCATGGCCCGACGGGACAAAAC
TTCACAATGGCCAGTAGTGAAAGTGTCATTTCGACGTCTGCTGCTGCTCCCAACACTCAA
GGGACCCACAGGAACGAACCGGCAGTCTCTAGCTCATTTGCTTTTGGTGTCTCAGCTCTT
CCTGTGTCGGGTCATACAAGTGCTCCTGACCAGCCTAAAGGAATATACCAAGCTGGTGCC
TCGGATTCTCTGTTTAAATCCTTGTTAGAACACGAAGACACATCCATCGAGTCCGAAAGC
TCTGTTTCTGAAGGTCCTGCTCCTGCTCCGGGTCCTGCTCCTGAACCTGCGTACTGCTCC
AACGCGTTGACCCTCAGTCTTGCAGGGTACTTTCGCAACAACCGCCAGTGGTACAGCTCG
ATTTTCACAGAACAGAATTCCCAGCACAAGCTCAGAGCATCTTTGATCTGCTATGCTCAC
GTAATTGGCGTCAAACTGGCCAAGTTGTACCCGGAAGTCCTCATGGTGGACATGCAAAAG
TCAATGGTTGAGATTGGAGGAGTCGATGCTACAGGACAGCATTTCCCCATCGCGTTTGGA
CACATTTTGGGCCACACGAAGGGCGTTCATTACACTATTCGGTGGCTCAAGGAAGTGGTC
TATTCTGCCAACGGCATTATTGATCCCGGTGTGATTGTTTCCACCTGTGAACTGCCTCAG
GAGGCCTACGATGTGTTTCCCAAGGTCAAGGTGATGAGAAACAGATGTCAGCTGGACTCT
CTGGTCTTGACACGAACCCAGAGACAGGATTCTCGACTCTCAGACATGTGGATGTATATC
ATGGGTCTGCGGTCCAAGAGCCTGGTGAAGAACGTCAATGGTCTGTTGTCTCGAGTTGAT
TTGGTTCCTTTCACAGACTTTGATCGGTGGTTTGCCAAGAACAAGAAAACCCTGTGCCCG
GCTTTCTTCGACCGCTATCCGCATTTCTCTGAGGTCAAAGTCATACCTGGAGCGCTTCAG
GGCACCGCTACACGTGCCGACGACCCAGTGTTTACGTTCGAAGCTCTCTCAAGGAACATT
ATTCCTCGATACAAGTTCATCGTCGACAATCAGAACTGGGAAAGAAAGGTGTTTGCTTCT
GAGAGACCTGAAGATGCCTTATTGAATGGCCGCATCTCCCACAAAGCCATGGATCTCATC
AATTTCCAGAGAACGGCGGCTGTGGAGAAATGTGGAGGACAAGACACCATTCATAGATGG
GACCGGTGTGTCTCGCGGGTTCTCGGCATCCCCTGTAGACACAGTTTGGATTATGTCAAC
AGACGGGCCATGGGGTTGACCGTCACCGAGATCCATCCTCATTGGCACCTCATGAACCCC
GAATTGCTCTACAGGGAGGACTTTGCTCCCACACTCAACACCATTGTCTATCCAGAGACA
GCTGTACAAAGTAACCAAGTGAGCGAGGAGGCCATTAGGAGCATGTTTGGCCAGAGTGGA
TTTGGCCCAGGCAGATTTGGAGGTGTGTAGCATTATGCATTATGAACTATGACATGACAA
ATAGACCTATAAACAGCGGCGGTCTTCATCAACCAGCTGTGGCGGTTCGTGTATGTTCCG
TCTAACTTAGTTGAACATTGGTCGTGATATAGTCAAAGAAGAGATGTGTCTCCAGAATAT
GTCAGCGAAAAGCTGGGGAAGGGATATTTCGCATTACTTGTTGTCGATAGCTTGTTAATT
TTATTACATCCATATTTTCGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D22506g_CDS-001

Protein length: 1490 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D22506g_CDS-001 MRRVDFSPYVAELRASAPHPPKIAHVTSGVSFHKLHAALNQFAKTYHYVFDASKPRRKDD
MECVVMKCCRRRCRYRLSVFSEASNAVDGALSWLEYDSDDMVEHNHELDGSDLTDEDRKR
MKRVEFKRKRNAKRVQQVEDSDTRTKESHSGDLRHGCDDELNGFNDLNGFVDPKGSNSYD
CDNGDDIMEEEFHSDEEPLFLCSEAEDSETSPAPEVAEQPQQSPVQRLDKYHSLFLHSEE
DDDEVQEIVATNKTNKTKSKPKKKKKIEIISLDSDSEEAEEERAQSSAKTISPQPKSESS
PATASGAQKKRAKSQTKPFSSSTTSSELSKTYSHEVLDTLKAQKRNHRVSKHQKERARVD
EITAKVRENEKLALENKKTELEQQVEATLSKREMVLKTYLRLEKGLRGAQLADSLSRMMR
VIKTQVQDELRGVHEEENEPVMLAESSFIVDDKDDKDEDGEYLEEELVKKDGRRKTSGTK
NKALEKAQRKKERKHERQAALMKLLDRRVMKEWRACPFCKRRFYPREIGKKTNSAEAELM
THIQLVHPDEVVYLDDLEEEEEEGEDAVQSDHGYGDSLNSSSDSEEEIVAVPRSRLRPRP
KVVVDEDSGNEEEPAVDPEVEPGTTVESPDGPELAEEDAEEEAEEEVEEEAEEEAEEEAE
EEAEEEAEEKAGEVDGPEVGELEPVDDVEVEVEAESVAADEITSESPQPVARSPKGKSPE
PASPVGEPIEEPTIKTTPAAESVDIVRTLAATEKAAPVTAASPVNTGSPVTAASPAKATA
HTATPQVKTSQTEPTATPAATVVPAVTSPVEASSLATQLAASADSAPTQPPSSANPFSTP
TKSPAKAMVVINLDDGDNEDDVVVVASTRSASSAIAAPGPSHSNTAPDGSDLAAQQTAKR
RHSSSLLPNVPFRYSRDPDPPYKRQKQVAELPTGGLTIQAPAYAHRDVTANSTRPTTFSS
DVTPFASSADPNSTGQGSVNPPHLPSLGTSPAGHGPTGQNFTMASSESVISTSAAAPNTQ
GTHRNEPAVSSSFAFGVSALPVSGHTSAPDQPKGIYQAGASDSLFKSLLEHEDTSIESES
SVSEGPAPAPGPAPEPAYCSNALTLSLAGYFRNNRQWYSSIFTEQNSQHKLRASLICYAH
VIGVKLAKLYPEVLMVDMQKSMVEIGGVDATGQHFPIAFGHILGHTKGVHYTIRWLKEVV
YSANGIIDPGVIVSTCELPQEAYDVFPKVKVMRNRCQLDSLVLTRTQRQDSRLSDMWMYI
MGLRSKSLVKNVNGLLSRVDLVPFTDFDRWFAKNKKTLCPAFFDRYPHFSEVKVIPGALQ
GTATRADDPVFTFEALSRNIIPRYKFIVDNQNWERKVFASERPEDALLNGRISHKAMDLI
NFQRTAAVEKCGGQDTIHRWDRCVSRVLGIPCRHSLDYVNRRAMGLTVTEIHPHWHLMNP
ELLYREDFAPTLNTIVYPETAVQSNQVSEEAIRSMFGQSGFGPGRFGGV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG