YALI0D22330g

Overview

Description weakly similar to uniprot|P32833 Saccharomyces cerevisiae YBR060c RRR1 origin recognition complex, 72 kDa subunit
Locus type CDS
Locus tag YALI0D22330g

Location

Species Yarrowia lipolytica Positions 2838351..2840006
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1656 (nuc.)
Previous locus YALI0D22308g Next locus YALI0D22341r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D22330g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D22330gYALI0D22330g_mRNA-001YALI0D22330g_CDS-001

Nucleotide sequence

 

>YALI0D22330g
ATGAGCAGAAGAAAAGCACCAGTTTCGTATTCCGGACTGGACACCAGTGACGTCAGCGAT
GAGGACTTTGAGGTTGAAGACGAGGTGAGCACACCCAAGAGAAGAAAGACCACGAGTCCG
AGAAAACAGACGCCGAGAAGGACGGCGTCGCCTCGAAAGGCACCGGGAACGCCGTCACCG
GTGAAACGGTCGCTCCACGACAAATCGGCGCGAAAAAAGGCCAACAGAACACTACTGGAT
CAGTCTCTGGGACTGGTGAGCGAAGACGAAGATGAAATTGAGCTGGCTGAACGGATCATT
GGAGAGAGCCGGGCTCCGATTCTCGACTCGTCCAACGACTTCCACACCGACGAACGGTCG
CTGGCCAACGTGGGTGCCCTGATTGCGGCTGAAGACCGCGTTCTGTTCCTGGACTCTTCA
GAGGGATACTTTGACCAACACAAGACCCGAGGACGAGGTAACGCCAACACCATGGCCAAG
GCGCCTGCCATCGACCACTCCGTCTTCTTTAAGTACACAAACCAGGCCAATGAGCTGTTT
CATGCCGACCAGAAGAAGATGCTGCGGCATGCTTACCGCGGAATGTTCTCGCAATGGATT
TTCGAGCTTTCGGAAGGGTTTTCGTTGCTGTTTTATGGTCTGGGAAGCAAGAGGGAGTTA
CTGACTGACTTTGTGTGCGAAAAAGTGGACTCGGAAATCCCCATTCTTGTCATCAACGGA
TACAATGCGTCTGTCCAGTTCAAGTCGGTGCTCAACAGCGTGGTGGACGTTCTCTACGAG
AATCATGAGGACATCTTTGCGAAAAAGGGCTTTGTGGTACGAAACAAACTGCCCAAGGAT
GTGGATCTCTTGGTGAAACTGGTGGTTGACACTATGCGAGATATTGAAGCTGGTTCAAAG
CCGTCGTTGGTGGTCTTGTGTCACAATGTTGATGGCGAGTCGTTGCGGATCGACAAGGCG
TCTACTCATCTGTCTCAGCTCATGAGTATTTCTCAAATCTGGTTTGTTGCATCTGTCGAT
CATATTATGGCTCCTTTGATGTGGGACTCTGCCAAGCTGGCCTCGTACAATTTTGTGTGG
CATGATGTGACCACGTTTGCTCCCTACACGGTTGAAACGTCGTTTGACGATCCGCTTTTG
CTTGGTAAGAAGGCTGAGGCCCAGGGTGCCAAGGGTGTCAAGTATGTACTTGAGTCGGTC
ACTCCGAACCATCGAAGTCTCTACAAGAACCTCATTTACTGTCAGCTGGAGGAGTTTCAC
AATGTGGCTGACAAGAGAAAGCTGCCTGAGGCCGAGGTGGGTGCTCTGACAGGAAGTACG
TCCATTTCTGTGGATTATGACAAGGTGTTGACGGAGTGTCTTAACGAGTTGACGGTTTCT
AACAAGAAGGATTTCCAGGAGAAACTCAAGGAGTTTATGGACCATAAGATGGTGGTTGCA
TTTGACGACAAGATGGGCATGAAAAAGCTGTACATTCCCTTTTCGAAGGATGTTGTGCAG
CAAATTCTGGAGGGATACCTTGACGCCTAGTGAGGTGAGGTTCACACAAGGCTCAAGTGG
GTGTAGGTCATGGCTGCAGATCATGTGGTCATAGAGCGTTCCACTCTGTATATAACAAAG
ATGTAATACGCAATTGATTTTCATGTCTGCAAGGGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D22330g_CDS-001

Protein length: 510 aa.
Product: Conserved hypothetical protein

>YALI0D22330g_CDS-001 MSRRKAPVSYSGLDTSDVSDEDFEVEDEVSTPKRRKTTSPRKQTPRRTASPRKAPGTPSP
VKRSLHDKSARKKANRTLLDQSLGLVSEDEDEIELAERIIGESRAPILDSSNDFHTDERS
LANVGALIAAEDRVLFLDSSEGYFDQHKTRGRGNANTMAKAPAIDHSVFFKYTNQANELF
HADQKKMLRHAYRGMFSQWIFELSEGFSLLFYGLGSKRELLTDFVCEKVDSEIPILVING
YNASVQFKSVLNSVVDVLYENHEDIFAKKGFVVRNKLPKDVDLLVKLVVDTMRDIEAGSK
PSLVVLCHNVDGESLRIDKASTHLSQLMSISQIWFVASVDHIMAPLMWDSAKLASYNFVW
HDVTTFAPYTVETSFDDPLLLGKKAEAQGAKGVKYVLESVTPNHRSLYKNLIYCQLEEFH
NVADKRKLPEAEVGALTGSTSISVDYDKVLTECLNELTVSNKKDFQEKLKEFMDHKMVVA
FDDKMGMKKLYIPFSKDVVQQILEGYLDA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG