YALI0D22308g

Overview

Description similar to uniprot|Q04307 Saccharomyces cerevisiae YDR045C RPC11 RNA polymerase III subunit C11
Locus type CDS
Locus tag YALI0D22308g

Location

Species Yarrowia lipolytica Positions 2837172..2838030
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 859 (nuc.)
Previous locus YALI0D22286g Next locus YALI0D22330g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D22308g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D22308gYALI0D22308g_mRNA-001YALI0D22308g_CDS-001

Nucleotide sequence

 

>YALI0D22308g
ATGCTAACGTTTTGTCCCACTTGTACAAACATGTTGACGGTGAGTAGGACGGGGGGATAT
TGAGGGCGGTTGCTGAGTCAGGATTGGGCCAGGAACGACCAGATCATAGGTCGCGTGGAT
GAAGGCGAGATGAGACGAGACGAGAAGCGAAAGGCGAAAGGCGAAAGGCGAGGGGCGAGA
GGCGAGAGAGGGTGAGGTGTCAGAAATCATTTGAAACTTCTTTATCACTAGTTATGTGCA
ATTCTACTCTTCTCTTACGGTTTTTTGCAGATCAATGAAGTGGCTAGTCATCGACCACAC
CCGAGAGAAGAGGTTGCCGAGTTCGATCTAGGTTGAGATTTGTCTAAAAGTATTTGTGTG
CGCATCTACCGTCCGCTTTTCTCCTTCACCGCATCTACCATGTCCCCATCTCGTGACTGA
TCTCGTTGCTGATCCCGTTACACACTCCACTTAAGCATGCTGAATCACCATTGACACTCC
ATATACTAACTCAGCTGTCGACCAGCGGAAACGGCATGCGGTTCGAGTGCCGGACATGTC
CCTACGAGTACTACTTGCAGGACGGCACCATCGTGTATGACCGAAAGGTCCTGGAAAAGA
AGAAGGTGGACAGTGTTCTCGGTGGAGAGAACGCCTGGGAGAACGTCGACAAGGACCCTG
GCTCGCAGTGTCCCAAGTGTTCCAACATGGGTGCTTACTTCTACATGTTGCAGATTCGGT
CTGCGGATGAGCCCATGACCAAGTTTTGCAGATGTACGGCCTGTTTCCACCAGTGGAGAG
AAAACTAGTGAGCTTAGACGTGCCAAACACGTTATGGGAAGGATAGAATGCATGTAATAT
ATTTATGATTGATTGTCTG

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0D22308g_CDS-001

Protein length: 111 aa.
Product: RNA polymerase III subunit C11, putative

>YALI0D22308g_CDS-001 MLTFCPTCTNMLTLSTSGNGMRFECRTCPYEYYLQDGTIVYDRKVLEKKKVDSVLGGENA
WENVDKDPGSQCPKCSNMGAYFYMLQIRSADEPMTKFCRCTACFHQWREN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG