YALI0D21978g

Overview

Description some similarities with uniprot|P40354 Saccharomyces cerevisiae YJR062c NTA1 amino-terminal amidase
Locus type CDS
Locus tag YALI0D21978g

Location

Species Yarrowia lipolytica Positions 2792795..2794249
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1455 (nuc.)
Previous locus YALI0D21956g Next locus YALI0D22000g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D21978g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D21978gYALI0D21978g_mRNA-001YALI0D21978g_CDS-001

Nucleotide sequence

 

>YALI0D21978g
ATGGCCACTACCGCGCGAACCACCACGCCTCTCAATCTCCAGATCGGCTGTTTGCAGCTC
AAGCCCGAGATCGGGGAAGTCGACAAGAACATGGGAGTGGCCAACGAGCTCATCGACCGG
TACTACGCCACTGCCAAGAAGGACGATAAGACCCCCAAGATTGATATCTTGATGCTCCCC
GAAATGTCATTCACAGGTTACAACTTCGAGAGCCCCGAGAACCTCAAGCCATTCCGAGAA
GAAACGGAGTCGTCCAAGTCGATCGAATGGGCTAGAGAGTGCGCCAAGAAGATCGACGGC
CACGTGCTGGTCGGATACCCCGAGTTTAGCCCTCAAGACGATGCGACCTACAACTCTGTG
TCCATGGTGTCTCCCAAGGGTGATATCCTCTTCACCTACCGAAAGTCGTTCCTGTACACC
GCCGACGAGGCAATGGGCATGAGCGAGTCTCCCGACGGCTTCCAGACATACGGACCCTTC
CCTTCTCTGTCTCAGGACATCCCTCTCAAGTTCCAGGTGGGAATTTGCATGGATATCAAC
CCCTACAAGTTTGAGTCTGCTCCTTCGGAGTACGAGTTTGGCAATTCAGTCAAGAAGAAC
AAGGTACCTCTGGTGCTGCTCCCAATGGCCTGGACTCACTCCAAGTCTCCCTCCCTAGTG
CCCGTCAAGTCCTCCGACAAGATCCCTATGACTGAGGAGCAGGAGAAGACCCACAGCGAG
CTCCGAAACGCCATTGTGCATAAGTGCACCATGCTGCACGGCAAGTCCACCTTTGATGGA
CTCATCACCGAGCCCAAGGAGATCCCCAAGTACAAGAACGAGGATCTGGCCACTTTCCAC
GACTACACTGCCGATGTCGACAACAAACTGCCTTTGGTGGACACCCTGCAGTACTGGATC
GAGCGTCTGCAGCCCGTGTGGAACCAGAACACGGACGTGGACTTCCCGGTGACCATGGTG
ACTGCCAACAGAGTTGGATTCGAGCAGGGAGACGTCCTGTACGCTGGCTCGTCCATGTGC
GCGGTTATGGATCCTCTTCAGCAGAAGATTTTTCTGCGAGGAGCTCTCTCAGCCGCTGAT
GAGGGTCTCATGGTGTTCAATGTTGATTTGAGCGTTCCCAACTAACAGCCTTAATGACTG
TCAGTGAGTGAGATGTGTGTTCAGGATGTGTTGCAACAACACACCATCTATGTATATATG
ATATTTTTTTGTTTCAAAGACGTGTAGCCGGGTGGCTTGGCTCTTTGCATATATTTTCTC
CTCTTTTCCAGCAGTTTTTATCAATTCTGAATCGACTTTTGACGTTGCTCAAAGAGCTCA
CATTCCTCAGAGGAATTCACATTCATACTGTGACTCAACTCTATACAAGCTACTGGAAAC
TAAAGAGATGATGTCGAAAAAACCTGTTGAAAGTGGATTTACGACATATAGGAGAATTGA
TATGGTCATCTAGAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D21978g_CDS-001

Protein length: 375 aa.
Product: Conserved hypothetical protein

>YALI0D21978g_CDS-001 MATTARTTTPLNLQIGCLQLKPEIGEVDKNMGVANELIDRYYATAKKDDKTPKIDILMLP
EMSFTGYNFESPENLKPFREETESSKSIEWARECAKKIDGHVLVGYPEFSPQDDATYNSV
SMVSPKGDILFTYRKSFLYTADEAMGMSESPDGFQTYGPFPSLSQDIPLKFQVGICMDIN
PYKFESAPSEYEFGNSVKKNKVPLVLLPMAWTHSKSPSLVPVKSSDKIPMTEEQEKTHSE
LRNAIVHKCTMLHGKSTFDGLITEPKEIPKYKNEDLATFHDYTADVDNKLPLVDTLQYWI
ERLQPVWNQNTDVDFPVTMVTANRVGFEQGDVLYAGSSMCAVMDPLQQKIFLRGALSAAD
EGLMVFNVDLSVPN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG