YALI0D21956g

Overview

Description similar to uniprot|P22214 Saccharomyces cerevisiae YLR268w SEC22 synaptobrevin (V-SNARE) singleton
Locus type CDS
Locus tag YALI0D21956g

Location

Species Yarrowia lipolytica Positions 2791591..2792482
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 892 (nuc.)
Previous locus YALI0D21934g Next locus YALI0D21978g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D21956g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D21956gYALI0D21956g_mRNA-001YALI0D21956g_CDS-001

Nucleotide sequence

 

>YALI0D21956g
ATGGTGCTCTCTACTCTGATTATGCGGGCCTCGGATGGCCTGCCTCTGTCGGCCAGCGTG
GATGACGGCCAGGAGAACCTCAGCGAGCAGAAGAAGCAGTGCAAGCTCGTGACCCAGAAG
CTGTCTGCCAACTCGGCCGACCGAGCCTCGATTGAAAGTGGCAACTACGTGATCCACTAT
CTGATGAAGGACGGAATCGTTTACTACTGCATCTCCGAGTCTTCGTACCCCCGCAAACTC
GCCTTCAGCTACCTAGACGAGCTGGATCGGGAGTTCCAAAAGTCCCATGGCCAGGAGGCT
CTCAAGGAGGGGGTGCGACCCTACAAGTTTGTGGAGTTCGACACGTTCATGCAGAAGACC
AAGCGGGTGTACCAGGACACTCGAGCAACCCACAACCTCGACAAGCTCAACACGGAGCTG
CAGGACGTGACTCGAGTCATGACCAAGAACATTGAGGATCTGCTGCACCGAGGCCACTCG
CTGGATCACATGAGCGATCTTAGCAGCAACCTGCGGACCGAGAGCAAAAAGTACCGACGG
GCTGCCCAGCGGATCAATTGGGAGGCCATGATCCGACAGTACATTCCCTTCATTGGAGTG
GGTCTCATTGGTCTGTTTATGCTGTGGTGGATGCTCTTTTAAACAGGGGGACGCAGATGA
GTCAATCATTTGGAAGATGGATGCCATCGACGACAGCCACGCCCGGGCTGAGAAGCTGTA
CTGAGGCTGTCTCAGCTCGCTGTGAACGGCTCGCTGAACGGGATATTGCTGGAGAAGCTG
GATTTATACGATAGTAATATATTGATTGGGTGAGTTGCTACTGGAATGATTGGGAAAGCA
GTACATACTATTAACCTGAAAGCAGTACATACTATTAACCTGTCCTTGCATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D21956g_CDS-001

Protein length: 214 aa.
Product: R-SNARE protein, putative

>YALI0D21956g_CDS-001 MVLSTLIMRASDGLPLSASVDDGQENLSEQKKQCKLVTQKLSANSADRASIESGNYVIHY
LMKDGIVYYCISESSYPRKLAFSYLDELDREFQKSHGQEALKEGVRPYKFVEFDTFMQKT
KRVYQDTRATHNLDKLNTELQDVTRVMTKNIEDLLHRGHSLDHMSDLSSNLRTESKKYRR
AAQRINWEAMIRQYIPFIGVGLIGLFMLWWMLF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG