YALI0D21230g

Overview

Description some similarities with uniprot|Q00658 Emericella nidulans FlbD
Locus type CDS
Locus tag YALI0D21230g

Location

Species Yarrowia lipolytica Positions 2683525..2686368
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2844 (nuc.)
Previous locus YALI0D21208g Next locus YALI0D21274t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D21230g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D21230gYALI0D21230g_mRNA-001YALI0D21230g_CDS-001

Nucleotide sequence

 

>YALI0D21230g
AAGAGCCACAGACAGAGGCGGGAGACACAGACAGAGGGCACAGAGCTCACAGAGAGAAAC
GAAACAAGCGAGAGGTTTGTTGTTGTTGTTGTTTTTTCGAGGAGGAGTTGGAAAAAAGGG
CGGCCAAAGACCGACTTGTGGGGGGCGTGGGCAACAACCGGTCGTCTCTCTCTCAGCAGC
AATGTAGCGGGTGTTGATTTGGGTGTCGTTGACAGGCAGCCATGTGATGGGTGGGTGTGA
GAGATGAGGTGGTGCTGAAAAGGAAGGGTTTAGGGTAATCATGGTGGCACGATATGGCAA
CACCCCAGAGGTCCTATTCGAAACGCTCCTTCACCACAGCTCAACACCGCCTACCCCGCA
TCGTCACACCAGCTCTCCGGGTCACGAACAACGTCTCTGCGGCAAGTGCCAGTACTAACA
CAGACCGACGCACAAACGCACGCACGCGCTACTACAAGACACTCTTCCACAGTGGCAACC
TGTCCACAGACACACAAGTGAGTATCAACGCATGGAGAGGGCATGAGGGGTGACGGAGGC
GGTGGTGAGAAGGTGGAGATGATGTTTTGGTCTGGGAAGCTCTGACGATGCTCCGATTTT
TGCCGCTCAGCTCCGGCTCAGTTCCGAACACTGGTGACACCTTCAACCCCCGCTAGCTCT
GCAGCTAAAATCCGGGCCAACAAACGCGGCTAGAGTATCATCACCTTGGGTCCCACGCAA
TGCGTACGCCTTTCGGACCTCAATATATACGTCCCGTAACTAACTCAGCACACACAATCC
ACACACTATTGGCCAAGTGAGTACATCAGATGGGGATATAAGCATCTGAAGCAAGCAAGG
GAAGCTGGAGAAGGAGCAGGAGAAGACGGAGAAGACAGAGCAGACAGAGCAGACAAGACG
GAGCAGATAGATAAGGCGATCGTTCAGGCTGGGTTACATGGTGACGTTCTTGGCTGAGCA
TGGACGAGCAATCCTACGATGCACAACCACGCCAACACGGTCTACAAGATGAAAGACACA
AAGCATACATCTGCTCGCAGGTGCGAGGCACGGAATCGTGGAAGCCATTACAGACACTTG
ACGCCCTAGGATATGACGCCTCCGACAACCGATGACGACTCCGACAAGGAGACAACTCGA
GGCAGCAAGCAACCAAGACATGAGTGCAGACACGACTAACAGACACAACTGCTCGACACC
GTGCCCCCCTGCAGTCTACCATAAATACAAGTGCCATTATCAGTCGCGGTCTCTCGTCTT
GATCTCTCGCACAGCTCTGGTACAACTCCAAGTTCCAACTACTCCTCCGCGCACCCATCC
CACATACTAACCTAGATGTCGACACGAAGAGGCCCCTGGAGTTCGGAGGAAGATCTCCGT
CTGCTGTCTCTGATCGACGACCACGGCCCCACCAACTGGGTGCGCATCTCGCAGATTCTC
GGATCTCGGACCCCCAAGCAGTGCCGAGAACGGTACCATCAGAACCTCAAGCCGTCACTC
AACCACAGCCCCATCTCCGAAGAGGAAGGAATCTACATTGAGCAGCTGGTGGCTCAGTAT
GGCAAAAAGTGGGCCGAGATTGCGCGCCATCTCAACGGCCGATCCGACAACGCCGTCAAG
AACTGGTGGAATGGAGGAGCCAACCGGAGACGGCGAGCCACCCTAGCTGCACATCAACGA
CGACCCACCTGGGACTTCGGCGCCCATGGAGGCGGACCTGGAGGACCCCCTCCCCCACCA
CCGGCCACACACGGTGTCCCCGGCATGCATGGTCCTCCTCCCGGAGTGGTTGGTCATCCC
GGAGGCTCTCCTCCCGACGGTGGCACCACACTTCCCCCCATGACGCCATACCACTCCACC
AACCCACAATACAACCGGCGGCTCTCACTGCCCAACCTGGCACCAGATCATGTGCCGCCA
CACCTATCCTCTCACACGGGACATCACGGACACAGCCATAGTACATCTGTGAGTCTCGCG
GCGAGCCACAGCAGCAGCTACGCCAACAGCCACGCACACACGCCTGAGGAACGTGAGTCA
CACCATCTGCCGTCGCTGGTAGCTGTTGGGGGAGGGGTGGGCGCACCGCCTCCTCCTGCC
CCCGGAGGAATCGTGTTCAACTCCGCGTACACGGATTCCGCCGGATCAGCTTTTAGCGGC
AGTGGAGGAGGTAATGGAGGCGCTGCTCCGGGCCCGCAGGGATCTTCAGTGGGTCCCACT
GCCGGCCCCGGGCCCGGAGCGCCCACTGGAACGTCCCCAGTGTCGACCCGTTCGCTTCAT
CATCTTCCTCCCTCCCGATACAACCGACGACAGTCAGCCACCACCGTGTCCACGGGCTAC
TCGTCGTCGCGACAGTCGTCTATTGGCGGCCTGTCTTCTGTGTCGGACACGGACGATCCG
TTTTCGTTTGGATCGTCGCTCAGCAAGTACTCTCTGGGTAACAGTGCCAGCAACTCGCGC
CGAAACTCGCACGTTCCCACAGCCACCGCCTCATCGAGCTCCCTTGATCCGGGTGCTCCA
CATCCTGCTCTGCTGCATTCGCGTCTGCATCAGCTTAGCAACGCGAACAGCGTGTCCAGC
AGCAGCGTCAACGCGTCATCTCCAAGTGATAGCGGCAGCAGCAGGCCTCCCAGCAACCGG
GGAAGCTTGTCTGGCCCCACCGGGCCACCTACGATGAACCTGGGCCACCGCCATAGCGTC
ACTGGAGTGCAGATTGAAAAGGACAAGGAGGGTGGAGGAGAGAAGTTGAAGATTTCCAAC
TTGTTGAGTTAGGGCTCATGAAATGCCGCGCAAAACACTTAATAGCGGTTACACATTGTA
TAGTAATGTATTTATTTATATGGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D21230g_CDS-001

Protein length: 479 aa.
Product: Conserved hypothetical protein

>YALI0D21230g_CDS-001 MSTRRGPWSSEEDLRLLSLIDDHGPTNWVRISQILGSRTPKQCRERYHQNLKPSLNHSPI
SEEEGIYIEQLVAQYGKKWAEIARHLNGRSDNAVKNWWNGGANRRRRATLAAHQRRPTWD
FGAHGGGPGGPPPPPPATHGVPGMHGPPPGVVGHPGGSPPDGGTTLPPMTPYHSTNPQYN
RRLSLPNLAPDHVPPHLSSHTGHHGHSHSTSVSLAASHSSSYANSHAHTPEERESHHLPS
LVAVGGGVGAPPPPAPGGIVFNSAYTDSAGSAFSGSGGGNGGAAPGPQGSSVGPTAGPGP
GAPTGTSPVSTRSLHHLPPSRYNRRQSATTVSTGYSSSRQSSIGGLSSVSDTDDPFSFGS
SLSKYSLGNSASNSRRNSHVPTATASSSSLDPGAPHPALLHSRLHQLSNANSVSSSSVNA
SSPSDSGSSRPPSNRGSLSGPTGPPTMNLGHRHSVTGVQIEKDKEGGGEKLKISNLLS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG