YALI0D20878g

Overview

Description similar to uniprot|P32353 Saccharomyces cerevisiae YLR056w ERG3 C-5 sterol desaturase singleton
Locus type CDS
Locus tag YALI0D20878g

Location

Species Yarrowia lipolytica Positions 2649114..2650458
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1345 (nuc.)
Previous locus YALI0D20856g Next locus YALI0D20900g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D20878g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D20878gYALI0D20878g_mRNA-001YALI0D20878g_CDS-001

Nucleotide sequence

 

>YALI0D20878g
ATGGATATCGCTCTGGAGACCATCGACACGTTTGTGTTCGACTACGTCTACGCCAAGGTT
CTGCCCTACAAAATGAAGCTTGCTCCCCAGGTGGCCAAGTTTCTCCGTGTCCAGGACTTT
TCAAAGTCTCTGATCGACCGCAACACGGGCTTTTTCTTCCCCGAGGCTGCGGCCAAGCTG
GCGACCGCCAAGAACCCCGAGTTCTACGGCGAGCCCGTGTTCTGGAAACACGCCTACGAC
CACGTTCTGGCCTGCGGCTCCATTTTCGCCCGAGACCACATCATCCGACAGATCATCTCC
TTCACCATCATCACAGCCACCTTTGGAGCGCTTCTGTACCTGTCGTTCGCCACGCTGTCC
TACCTGTTTGTGTTTGACCGAGATACCTTCAACCACCCCCGTTTCCTCAAGAACCAGATC
ACCCTGGAGATCACCCAGGCCCTGAGCGCCATCCCCTTCATGTCTCTGTGCACCGCCCCG
TGGTTTGTCGCAGAAGTCAGAGGCTACTCACGCATGTATCTGGAGGTTGAGAAACACGGC
TGGCTGTACTTGATTTTGCAGTTCCCGCTGTTTCTCATGTTTACCGACTGTGGCGTCTAC
CTAATCCACAGAGGTCTGCATCACAAGTGGGTCTACAAGCACCTGCACAAGCCCCATCAC
AAGTGGATCATGCCCTCTCCGTTCGCGTCGCATGCCTTCCACCCTCTCGACGGCTACTTT
CAGTCTCTGCCCTACCACATTTTCCCCTTCCTGCTACCTCTCAACAAGATTTCCTATCTG
ATTCTCTTCACCTTTATCAACTTCTGGACCATTATGATCCACGACGGCGAGTTCCTCGTC
AACTCTCCCGTCATCAACGGTACCGCCTGTCACACGGTCCACCACCTGTACTTCAACTAC
AACTACGGCCAGTTCTTCACTCTGTGGGACCGAGTGGGAGGCTCGTACCGACAGCCCGAA
GATGAGTTCTTCGACCACTCCCTCAGGAAGGACGAGCAGACCATCCGACGCCAGGTTGGC
GAGTTTGAGAAAATCCGAGCCAAGGAGGAGAGCGCTGACGATCGAGTCTACGTTGGAGAT
ACCGCCGCCAAGAAGACTGTTGCTGTCAAGCGAAACACCAAGCAGGATTAAATCTTTTGA
CCATGAAGCGAAGGACAAGGACAACAAAGCGGCGAAGCGAATGCCTGGGCTCTTTGACAG
CTGCTTTGTTCTCAAAGGGGACGATAAAGAAAACAGTAGATAATTCCGTCTTACGACGAA
GAGTTGAGGGAGCAAGACTCCACAGCTGGTAACGAGTTACGATATTTTAATAAATTAGAC
GCGCGATTAGCGATTATGGAGGTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D20878g_CDS-001

Protein length: 377 aa.
Product: C-5 sterol desaturase, putative

>YALI0D20878g_CDS-001 MDIALETIDTFVFDYVYAKVLPYKMKLAPQVAKFLRVQDFSKSLIDRNTGFFFPEAAAKL
ATAKNPEFYGEPVFWKHAYDHVLACGSIFARDHIIRQIISFTIITATFGALLYLSFATLS
YLFVFDRDTFNHPRFLKNQITLEITQALSAIPFMSLCTAPWFVAEVRGYSRMYLEVEKHG
WLYLILQFPLFLMFTDCGVYLIHRGLHHKWVYKHLHKPHHKWIMPSPFASHAFHPLDGYF
QSLPYHIFPFLLPLNKISYLILFTFINFWTIMIHDGEFLVNSPVINGTACHTVHHLYFNY
NYGQFFTLWDRVGGSYRQPEDEFFDHSLRKDEQTIRRQVGEFEKIRAKEESADDRVYVGD
TAAKKTVAVKRNTKQD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG