YALI0D20856g

Overview

Description similar to uniprot|P43569 Saccharomyces cerevisiae YFL028c CAF16 ATP-binding cassette transporter family member singleton
Locus type CDS
Locus tag YALI0D20856g

Location

Species Yarrowia lipolytica Positions 2646136..2646976
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 841 (nuc.)
Previous locus YALI0D20845r Next locus YALI0D20878g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D20856g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D20856gYALI0D20856g_mRNA-001YALI0D20856g_CDS-001

Nucleotide sequence

 

>YALI0D20856g
ATGTCGATCACGGCGCAAAACCTCTCCTACACCTTCCCCAATGGGCTTGTGGGCATCCAT
CCCACCTCGTTCGACCTGCCTCCCGGGTCTAGAACGTTGCTGATCGGAGCCAATGGAGCT
GGAAAGTCGACGTTGCTGCGAATTCTGGCGGGAAAGACCCTCGCCAAGGCCGACAGTCTC
ATTGTCCAGGGCTTTGATCCCTTCCGAGACTGTTCTCCTCCTGGAATCCGGTACCTGGGC
ACCGAATGGGCCGGCAATCCAATCGTGAGACATGACATTGAGGTCACCCAGCTGCTAAAG
TACGCCGGAGGAGATGCCTATCCTGACCGACGAGACCATCTTGTGCAGCTGCTGGACGTG
GATCCCACCTGGCACATGCACGAGGTGTCTGACGGAGAGCGTCGGCGAGTGCAGCTAGTC
ATGGGACTGCTGGTGCCGTGGGAAACTCTTCTGCTGGACGAGGTGACGGTTGATCTGGAC
GTTCTGGCCCGAACTAACCTGCTCAACTTCCTCAAGGAGGAGACCGAGACCCGACAAGCC
ACCATTGTTTACGCCACCCATATTTTCGACGGCCTCAACCAGTGGCCTACGCACGTTGCC
CATATGAGCCAGTCCACCATGTTGAGTTGCGACACCTACGATGTGGTCCAGCGGGAGTTC
CCCGGCAAGAGCATTCTGGAAATTGCACTGGGCTGGATCACCGGGGATATGGAACGGCGT
GGGCCTCGCCTCCCCAGAGCAAAGAGACAGAGGGTTAACTAGGCTATCCACCGACAGTGC
GATAGATGCATCGACCAATGTACATGTAGATATATAATAGATCTGATACTAATGATATGG
T

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D20856g_CDS-001

Protein length: 254 aa.
Product: Part of evolutionarily-conserved CCR4-NOT regulatory complex, putative

>YALI0D20856g_CDS-001 MSITAQNLSYTFPNGLVGIHPTSFDLPPGSRTLLIGANGAGKSTLLRILAGKTLAKADSL
IVQGFDPFRDCSPPGIRYLGTEWAGNPIVRHDIEVTQLLKYAGGDAYPDRRDHLVQLLDV
DPTWHMHEVSDGERRRVQLVMGLLVPWETLLLDEVTVDLDVLARTNLLNFLKEETETRQA
TIVYATHIFDGLNQWPTHVAHMSQSTMLSCDTYDVVQREFPGKSILEIALGWITGDMERR
GPRLPRAKRQRVN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG