YALI0D20790g

Overview

Description weakly similar to uniprot|Q9P6R9 Schizosaccharomyces pombe Cell cycle control protein cwf22
Locus type CDS
Locus tag YALI0D20790g

Location

Species Yarrowia lipolytica Positions 2636443..2639383
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2941 (nuc.)
Previous locus YALI0D20768g Next locus YALI0D20812t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D20790g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D20790gYALI0D20790g_mRNA-001YALI0D20790g_CDS-001

Nucleotide sequence

 

>YALI0D20790g
ATGAGTGATAAAGAACGCGAACGTGAAAGGAGTCAATCACGTGAAAGGAGCCGAACACGT
GAAAGGAGCCGAACACGTGACTCGAAGCGTGACCATTCCGATTCTCGATCCCTCCGGAGA
CGCAGTTATCGTGGCGACAGATCGAGAAGCCCGTCACGATCTCGGTCCAGGTCATATTCT
CCATCTCGGTCGCCCCGAAGGAAGCGGCGCCGACACAGAACCAGTCGCAGAAGCCGGAGG
TCACGAAGGGAAGGTGATGGACGACGCAAAGATGGCCCTAGAGGCCATGATGACAGAAGC
CCCTTGGCCCCTAGGGAGGTGGAGGATGTGACTGTCAAGAGGGAGGATAGCACGAACGAC
AAGGAAAGTACTCACGACAAGGAAAGTACAAACGACAAGGAACGCAATGTCTCGATGGAG
GACAGGAAGGATACTTCTGAGGATGTTGTGGAGGATGTGGAGGAGGGGGATCCTTCTGAA
GAGGCACTGGAAAAAAAAGTAAAGAACCCAGAAGATGACTTGGAGGCAGCGGCAGAAGAG
CTCAAGAAACTCATGGAGCTAAAGTCTGGAGGCCGATACGTTCCTCCTGCTAAAATCAGA
GCGCTTCAGAAGCTGCTGGTCCAGGATAAGACGTCCAAGGAGTTCCAGAAGATCCAGTTT
GACAATCTCAAAAAGGCAATCAACTCGCTGGTGAACAAGGTCAGTGCTCAGAACATTCGA
GATATTGCGGGGGAGATTTTCACTCATAATCTCATCCGAGGACGTGGGCTGTTCTGTAGA
AGTGTCATGACCGCCCAGAGTCTTGCTCTGCCCTATACGCCTGTCTACGCCTGTCTGACG
GCCATTGTCAACTCCAAGCTACCTCAGGTTGGCGAGCTGCTTGTGCGACGACTCATTCTG
CAATTTCGACGGGGCTACAAGCGTAATCAGAAGGACGTGTGTTTGTCAAGTGTGACGTTT
CTGGCGCATTTGTGCAATTACCATGTTGCTCATGAGGTTCTAGTGCTTCAGTTGCTGCAT
TTGTTGCTTGAGACCCCCACAGATCACTCTGTCGAGGTTGCTGTAGCTTTCATCAAGGAG
TCCGGTGCCTTTTTGGCCGAAGTTTCGCCTGCTGCCAACAACGGAGTATTTGAGCGTCTT
CGAGCTGTGTTGCATGATGGCGAGCTGGAAAAACGAACGCAGTACATGATCGAGACGCTG
TTCCAGATCAGAAAAGACGGCTACGAAAACTACCCTGTGGTTCAAGAAGAACTGGACCTG
GTAGACGAGGAGGACTATGTGACACATATGACGGGTTTGGACGACAAGTTTACAGATGAT
AAGCTGCTCAACTACTTTGTTATGGACCCTGACTACGAGGCCAACGAGGAGAAGTACGAT
TTGCTGAAAAAGGAGATCCTGGGAGACTCTGACGACGAAGAGGAAGATGATAGTGAAGCC
GAGGAAGAGGCAGATGATGAAGAGGAGGAGGAGGGGGATGAAGAGGAGGAGGCTCAAGCC
TCTACCTCGGCTGTGCGAGACCTCACGGGTACAGAGCTTGCTACGTTGCGAAAGAAAATT
TATCTGACGGTCATGTCGACCATGTCGATCGACGAAATCGTTCACAAGCTTGTCAAGCTG
TCTCGAACGGTTATTGAGATCCCTGAGGGTCTCCCCGAAGACCAGGCTCTGATTCTGCGT
CTCAAGCGGACCCAGGAGGTGACGAACATGCTTGTGGAGTGTTGTGCTCAAGAGAAGATT
TATAACAAAATCTACGGAGGTACAGGAGAGCGGCTTCTGAGACTGTCGCGGGAATGGAGA
ACCAACTTTGAGAACACCTTTGGGTTCTTTTACTCGGTTATCCACAGATACGAGCCCAAT
CAGATCAGAAACATTGCCACGTTCTTTGGGTACCTGTTGGCATCAGATTCTCTGTCGTGG
AAGGTTTTGGAGGCTGTTTCTCTGACTGAAGAGGACTCGAACCCCTCGAACCGTATCTTT
CTCAAGATTATGTTCACCGAGATGCGTCAGGAGCTGGGAATGGATCTGTTGAAGGAGCGA
CTTTCCAAGCCGTTTGTGCAGCAGTACATTGCCGGTATGTTCCCCAAGACGAATGCTTCT
CATGTTCGGTTTGCCATCAACTATTTCACTGCCATTAATCTTGGTCCTTTGACAGATGGT
ATGCGGGAGATTCTTCCTGGTCTGGTGGAGGAGGAGGAGAGGCTGAAGAAGGAGGAGGAA
GAGCAGAAGCGAGAGTACGACAGTTACGATTCATACGACAGTTATGACTCATACGACTCC
TACGACTCCTACGACTCCTACGACTCCTACGACTCCTACGATAGTTACGACTCCTACGAT
AGTTATGACTCCTATGACTCCTATGACTCCTATGACTCAGTGTCTGAGGATGATCGGGGG
CGACGACGACGACGAGGTGTAGGAAGTAGAAGGCGGTCGCTAACTCGGTCTCCTGGTTCG
CGGTCACGGCCACGATCCCGGCCACGATCCCGGTCACGGTCAAGATCTCTATCTCGGGAT
AGAACCGGTTCTCCGCCTCGTGGTCGACGGCGGTCTCGATCTTATTCCCGTTCGCCTTCG
CGGTCATACTCTCGTTCGAGATCTTATTCCCGATCGCCATCTCCGAGACCTAAATCTAAA
GGGGCTAAAGGCCGGAGCAGTTACCGGGCCGCCAGTTATTCGCGGTCGAGATCTCCGGTC
AGACGAGTTGGTTATTCTAGAAGCAGGTCTCCAAGCGTGTCTGGAGGTTCCTCTCGAAGT
CCTTCTAGAAGTCCTTGTAGAAGCCCCAACAAGGGCCGTGCTCCTACTCCGGAGAAAGGT
CTTTCGCCGCCTCGAAAGCGAGTGCGCGCCAGTGATTTGTTCTAACACACGCCCCCCGCA
CCCCCCGCACCCCCCGCGCCATCAGGTAGATGTAAAGATGTAATTGATACTGTATTTTTT
T

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D20790g_CDS-001

Protein length: 955 aa.
Product: Conserved hypothetical protein

>YALI0D20790g_CDS-001 MSDKERERERSQSRERSRTRERSRTRDSKRDHSDSRSLRRRSYRGDRSRSPSRSRSRSYS
PSRSPRRKRRRHRTSRRSRRSRREGDGRRKDGPRGHDDRSPLAPREVEDVTVKREDSTND
KESTHDKESTNDKERNVSMEDRKDTSEDVVEDVEEGDPSEEALEKKVKNPEDDLEAAAEE
LKKLMELKSGGRYVPPAKIRALQKLLVQDKTSKEFQKIQFDNLKKAINSLVNKVSAQNIR
DIAGEIFTHNLIRGRGLFCRSVMTAQSLALPYTPVYACLTAIVNSKLPQVGELLVRRLIL
QFRRGYKRNQKDVCLSSVTFLAHLCNYHVAHEVLVLQLLHLLLETPTDHSVEVAVAFIKE
SGAFLAEVSPAANNGVFERLRAVLHDGELEKRTQYMIETLFQIRKDGYENYPVVQEELDL
VDEEDYVTHMTGLDDKFTDDKLLNYFVMDPDYEANEEKYDLLKKEILGDSDDEEEDDSEA
EEEADDEEEEEGDEEEEAQASTSAVRDLTGTELATLRKKIYLTVMSTMSIDEIVHKLVKL
SRTVIEIPEGLPEDQALILRLKRTQEVTNMLVECCAQEKIYNKIYGGTGERLLRLSREWR
TNFENTFGFFYSVIHRYEPNQIRNIATFFGYLLASDSLSWKVLEAVSLTEEDSNPSNRIF
LKIMFTEMRQELGMDLLKERLSKPFVQQYIAGMFPKTNASHVRFAINYFTAINLGPLTDG
MREILPGLVEEEERLKKEEEEQKREYDSYDSYDSYDSYDSYDSYDSYDSYDSYDSYDSYD
SYDSYDSYDSYDSVSEDDRGRRRRRGVGSRRRSLTRSPGSRSRPRSRPRSRSRSRSLSRD
RTGSPPRGRRRSRSYSRSPSRSYSRSRSYSRSPSPRPKSKGAKGRSSYRAASYSRSRSPV
RRVGYSRSRSPSVSGGSSRSPSRSPCRSPNKGRAPTPEKGLSPPRKRVRASDLF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG