YALI0D20768g - LPD1

Overview

Description uniprot|Q6C8C6 Yarrowia lipolytica YALI0D20768g LPD1 Dihydrolipoamide dehydrogenase
Locus type CDS
Gene name LPD1
Locus tag YALI0D20768g

Location

Species Yarrowia lipolytica Positions 2634118..2636184
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2067 (nuc.)
Previous locus YALI0D20746r Next locus YALI0D20790g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D20768g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D20768gYALI0D20768g_mRNA-001YALI0D20768g_CDS-001

Nucleotide sequence

 

>YALI0D20768g
AGTGAGTATCTTGTGCGCCAATTCTTAAACGCCACCAGCGCCGCCCTCAGACCCTCCGCG
CGAACACGGACCTGTCATAGTGCACGTATGTACAGTATGTACTGGCAGGAGAGTGTGTGA
ACTCAAATGTGACATTTGCCTTTGACTATTGTTCCGGACCCAACAAGAGCAGGGTAAGTC
TGCTGCGAGGAGCGCACCTACAGAGACGCATAGTTTAACAACTCACCCAGACCCTTCCGA
AATTCACACACATTTCCAACACGACAATGTTGCGAACCACTCGAATTCTTCCCTCCAAGT
TCGGCGTTGCTGCCCGAACCCGAGCTGTGACCCAGTTCCAGCGATGCTACAGCTCCGGTG
AGTATCTGTGCGACAGGGAGGGCTTTTTTACGGGGAAAAAACTCCCCCGATGCGATACCA
CCATGGCCGCGACGACACACAAGGATCCATGGGAAGAGGCAATGAGAAAAGGACATGAGA
CGTGTCAATTGGACATTTTGAATTGCGAATTGTGCCACTGTCTTTTGTCTGCACCATAGT
CGCCCCGTTGCACCCCTCCGGCCAGCGTCCGCCACCCCACACAAGGCAAATACTAACAAC
AGCAAACGAGGAGCTTGATGTCCTTGTTATCGGAGGTGGCCCCGGTGGATACGTCGCCGC
CATCAAGGCCGCCCAGGCCGGCCTCAAGACCGGCTGTATCGAGAAGCGAGGCTCCCTCGG
AGGAACCTGTCTCAACGTCGGATGTATCCCCTCTAAGTCTCTGCTCAACAACTCCCAGAT
GTACCACGCCATCAAAACCGACTCCGCCAACCGAGGAATCGAGGTCTCTGACGTCAAGAT
GAACATCGCCAAGCTGCAGGAGGCCAAGGAGACCTCCGTCAAGGGTCTCACCGGCGGTAT
CGAGATGCTGTTCAAGAAGAACAAGGTCAACTACTACAAGGGCGCCGGTTCTTTTGTGTC
CGACTCCGAGGTCAAGGTCGACCCCATTGATGGCGGCGAGGCCGTCACCCTCAAGGCCAA
GAACATCATCATTGCCACCGGCTCTGAGCCCACCCCCTTCCCCGGCATCACCATTGACGA
GAAGAAGATTGTTTCCTCCACTGGTGCCCTTGCCCTCGAGGCCGTCCCCAAGAAGATGGT
CATCATCGGAGGAGGTATCATTGGTCTCGAGATGGGCTCCGTCTGGTCCCGACTCGGCTC
CGAGGTGACTGTTGTCGAGTTCCAGAACGCCATTGGCGCTGGTATGGACGACGAGATCGC
CAAGGCCGCCCAGAAGATGCTCACCAAGCAGGGTATCAAGTTCAAGCTTGGCACCAAGGT
GCTTTCCGGTGCCATTGAGGGCGACGGCGTCAAGGTCGAGGTCGAGAACGTCAAGAAGGG
CGACAAGGAGACCCTTGATGCCGACGTTCTGCTCGTTGCCATTGGCCGACGACCCTACTC
CGAGGGCTTGAACCTCGAGGCTGCCGGTGTCGAGAAGGACGACAAGGGCCGAATCATCAT
CGACCAGGAGTACCGAACCAACAAGTCCAACATCCGATGCATTGGTGACGTCACTTTCGG
CCCCATGCTGGCCCACAAGGCCGAGGAGGAGGGAGTTGCTACCGCTGAGTACATTGCCAC
CGGTCACGGCCACGTTAACTACGCCGCCATCCCCTCTGTCATGTACACCCACCCTGAGGT
TGCTTGGGTTGGACAGACTGAGCAGCAGGTCAAGGAGGCCGGCATCAAGTACAACGTCGG
CAAGTTCCCCTTTGCCGCCAACTCTCGAGCCAAGACCAACCTCGACACCGAGGGTACCGT
CAAGTTCATTGCTGACAAGGAGACTGACCGAATTCTCGGTATCCACATCATTGGCCCCAA
CGCCGGTGAGATGATCGCCGAGGGTGTTCTTGCCCTTGAGTACGGTGCTTCTTGCGAGGA
CATTGCTCGAACCTGCCACGCCCACCCCACTCTCTCCGAGGCTTTCAAGGAGGCCGCCAT
GGCCACTTACGACAAGGCCATCCACTTTTAAGCGCTTTTAGTGGTGCTTTTAGTAGTAGA
TAATAATGACTGAACTGTATGGTAGCG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D20768g_CDS-001

Protein length: 500 aa.
Product: Dihydrolipoamide dehydrogenase
Gene: LPD1

>YALI0D20768g_CDS-001 MLRTTRILPSKFGVAARTRAVTQFQRCYSSANEELDVLVIGGGPGGYVAAIKAAQAGLKT
GCIEKRGSLGGTCLNVGCIPSKSLLNNSQMYHAIKTDSANRGIEVSDVKMNIAKLQEAKE
TSVKGLTGGIEMLFKKNKVNYYKGAGSFVSDSEVKVDPIDGGEAVTLKAKNIIIATGSEP
TPFPGITIDEKKIVSSTGALALEAVPKKMVIIGGGIIGLEMGSVWSRLGSEVTVVEFQNA
IGAGMDDEIAKAAQKMLTKQGIKFKLGTKVLSGAIEGDGVKVEVENVKKGDKETLDADVL
LVAIGRRPYSEGLNLEAAGVEKDDKGRIIIDQEYRTNKSNIRCIGDVTFGPMLAHKAEEE
GVATAEYIATGHGHVNYAAIPSVMYTHPEVAWVGQTEQQVKEAGIKYNVGKFPFAANSRA
KTNLDTEGTVKFIADKETDRILGIHIIGPNAGEMIAEGVLALEYGASCEDIARTCHAHPT
LSEAFKEAAMATYDKAIHF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG