YALI0D20570g

Overview

Description highly similar to uniprot|P39077 Saccharomyces cerevisiae YJL014w CCT3 chaperonin of the TCP1 ring complex, cytosolic
Locus type CDS
Locus tag YALI0D20570g

Location

Species Yarrowia lipolytica Positions 2610809..2613161
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2353 (nuc.)
Previous locus YALI0D20548g Next locus YALI0D20592g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D20570g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D20570gYALI0D20570g_mRNA-001YALI0D20570g_CDS-001

Nucleotide sequence

 

>YALI0D20570g
ATGCAAGCTCCTGTTGTTGTTATGAGTGAGTATTGCGTGCTACCGCGTCCCACGACTTGC
CCCGTGTTGTCCGCGACGGGTTTTGCGGCACAAATCGCCACCTAGGTCTGGTGTTATGCT
CTACGTGTAACTCCAACATGACTAAGAACACCATGCGAAATGGTACCCGGTGGATACAAA
AGGGGCCGCAAAAACACAATCGACGAACAACTACTAACTGCAGACGCCGGCCAGGAACGT
CAAATCGGACGAAAGGCCCAGACCAGCAACATTACTGCTGCAAAGGCGTGAGTATGGAGT
GTGGAGGGTGGAATTGGAGGGGTGGACGGCCTCTGAAGCAAATTGGAGGCAAATTGGGGC
GTTTGGGGTAGCTGTTTTACCCTTTATATGTTGTTTGGACTTCCAATTTGGCTGTGGACA
GCTGCTTCGGCCATCTTTTCTTATAGGGCGGACATTTGATTTGTGGTGATATCAAGCTGT
AGAGTCGTGTTTGGGGGAATGCAACACCACCATTGAACTCCTCCCGACGAGTCGACTCCG
CCGGTTCCATCATTACGCTTATCCAACATCCACCACCCTCAGAAATGTTACTAACCCAGT
GTCGCCGATATTGTGCGAACGTGTCTTGGTCCCAAGGCCATGCTTAAGATGCTTCTCGAC
CCCATGGGAGGTATCACCCTAACCAACGATGGTCACGCCATTCTGCGAGAGATTGAGGTC
ACCCATCCTGCAGCCAAGTCCATGATCGAGCTGTCTCGAACCCAGGACGAGGAGATTGGA
GACGGAACCACCACCGTCATCATTCTTGCCGGAGAGATTCTCGCTCAGACCTTCCCCTAC
GTGGAGAAGAACATTCACCCCGTTGTCATCATTGCCGCCCTCAAGGATGCACTTGCTGAG
GCTCTCAAGGTTGTAGAGGAGATTTCTGTTCCCGTTGACGTCAACAACGAGGCTGCCATG
AAGAAGCTCATTGCCGCCTCCATCGGCACCAAGTACGTGTCCCGATGGTCCGAGCAGATG
TCCTCTCTGGCTCTCAAGGCCGTCAAGACCGTTGCTGTCGACATTAACGGCAAGAAGGAG
GTTGACATCAAGCGATACGTCCGAGTGGAAAAGATTCCCGGAGGTGAGATTGAGGACTCC
CGTGTGTTGGACGGTGTCATGATCAACAAGGATATCACCCACCCCAAGATGCGACGGCGA
ATCGAGTCTCCCCGTGTGGTGCTGCTTGACTGTCCTCTCGAGTACAAGAAGGGTGAATCT
CAGACCAACATTGAGATCAGTAAGGAGGCCGACTGGAACCGAGTGCTGCAGCTGGAGGAG
GAGCAGATCAAGGCGCAGTGCGAGGTGCTGCTATCGGTAAAACCCGACCTGATCATCACC
GAGAAGGGTGTGTCTGATCTGGCCCAGCACTATCTGCTTAAGGGCGGCTGCAGTGTGCTT
CGACGAATGCGAAAGAGCGATAACAACCGAATCTCACGAGTCACTGGCGCCACCATCGTC
AACCGAATCGAGGACATCAAGGACTCCGACGTTGGTACTCTGTGCAACCTGTTTGAGATC
TCCAAGATTGGTGATGAGTACTACACATTTATCACAGGCGAAGACCCCCAGGCATGCACC
GTGCTGCTGCGAGGACCCTCCAAGGACATTCTCAACGAGATTGAGCGAAATCTGGCTGAC
GCCATGGCTGTGGCTCGAAACGTCTTCTTCGAGCCCAAGCTGGCTCCCGGAGGAGGTGCT
ACAGAGATGGCTGTGTCCGTGCGACTGGCCGAGCATGCCAAGACCATCGAGGGTGTTGCA
CAGTGGCCCTTCAAGGCCGTGGCTGATGCCATGGAGGTGATTCCCCGAACCCTGGTTCAG
AACTGTGGTGGTAATGCCATTCGAACTCTGGCCACCCTGCGAGCTAAGCAAGCCGAGGGT
TTCTCCACATACGGCATTGACGGTGACAACGGAAAGGTTGTTGACATGAAGGAGTACGGC
GTGTGGGAGCCTGCTGCCATCAAGCTGCAGAGTATCAAGACCGCCATTGAGTCTGCTTGC
TTGTTGTTGCGAGTCGACGATATCGTGTCTGGAGTTAGAAAGAAGGGCGAGTAAAATGGG
TTTGGATAATGATATTATAGATGTTTTGCGACACACTGCAGTGTAGTCATACCGTTTACA
ACACCGATACTGCCTTTGAAAGTTGATGGCTCTGTACAAATCTTGGTGTAGACATTGGGC
TGATACTGTATACACTCCGATGAACAAGACCACAAAGAGAAACAAAACTGGTAACGGTAT
TTATGACACTATCAACTCTCGTGTGTACTTGTACTTGTACTTGATTGATCAATCGTTATT
GTTCATTAAATTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D20570g_CDS-001

Protein length: 528 aa.
Product: Chaperonin of the ring complex, cytosolic, putative

>YALI0D20570g_CDS-001 MQAPVVVMNAGQERQIGRKAQTSNITAAKAVADIVRTCLGPKAMLKMLLDPMGGITLTND
GHAILREIEVTHPAAKSMIELSRTQDEEIGDGTTTVIILAGEILAQTFPYVEKNIHPVVI
IAALKDALAEALKVVEEISVPVDVNNEAAMKKLIAASIGTKYVSRWSEQMSSLALKAVKT
VAVDINGKKEVDIKRYVRVEKIPGGEIEDSRVLDGVMINKDITHPKMRRRIESPRVVLLD
CPLEYKKGESQTNIEISKEADWNRVLQLEEEQIKAQCEVLLSVKPDLIITEKGVSDLAQH
YLLKGGCSVLRRMRKSDNNRISRVTGATIVNRIEDIKDSDVGTLCNLFEISKIGDEYYTF
ITGEDPQACTVLLRGPSKDILNEIERNLADAMAVARNVFFEPKLAPGGGATEMAVSVRLA
EHAKTIEGVAQWPFKAVADAMEVIPRTLVQNCGGNAIRTLATLRAKQAEGFSTYGIDGDN
GKVVDMKEYGVWEPAAIKLQSIKTAIESACLLLRVDDIVSGVRKKGE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG