YALI0D20482g

Overview

Description some similarities with uniprot|P78688 Gibberella fujikuroi Nitrogen regulatory protein areA
Locus type CDS
Locus tag YALI0D20482g

Location

Species Yarrowia lipolytica Positions 2598215..2600191
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1977 (nuc.)
Previous locus YALI0D20460g Next locus YALI0D20504g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D20482g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D20482gYALI0D20482g_mRNA-001YALI0D20482g_CDS-001

Nucleotide sequence

 

>YALI0D20482g
ATGTCGTTTATGCCAATGGATCTCGACATTGGACACGATTATATCGGGTCAAGTGGGCCG
TTTGGAAACCACATGGACTACCAGACCACCAACAACCATTTCGTCTCTTCGGGCGCCTCT
TCCAACACCTCGTCGTTGTTTACCAACACAACCTCGGTCGAGAGCATGAGCAGTTTTGGC
GGAGGAGGTTTCAACACTTTGAAAAACGATGGATTGACACAGATGAACCAACCTGCAGCA
CCGGTGTCTGCAGCTGCAAAACGAATAGGCCTCTCGTCAGACCCCAGCACAGATCTCGCC
ATGGTCACCAACATGTGGAAGATGTATTCCAAGGCCAAATACCAGCTGCCCAACCAGGAG
CGAATAGCCAACCTGACGTGGCGGATGATGGCGCTGGATCTCAAGAACTGCGCGCTGCAG
TACCACGCAAAAATGGCCCAGAAACTGCACTCCAAGCTGGGCCAGAACGCATCTGTGCAT
CGGGATTCTCGGGTCGTCATGAGCGCTGAGATGGGCCTTCGCCAAGCTGCCGGTGGCCAT
GATAATGATGATAACGATGACACCGACTCGTTTGACTACATGGCCCACATTAAGCGGCTC
AGCGAGTCCAACCGGAACCGATGGGCTCCCCAGAACAATACCACCAACACTGGCCACAAT
AGCCACAACAACCACAACCACAACGAATACACTCCGTCGGTCAACGGAGGCCATATGAGC
AACTCGACGCTCACTTCGCCGTCACATGTCACTTCTCCCATCACCTTCACCGCCAACGAC
TTCCATGCTCCCGCTGACTACTCGCAATCGCTCCCCGCCACCACGTTCCGACGTCAATCC
TTCATGGACGACGCCCCCAACGCGTTTCACTTCTCGCTGGACCCCCTGGCGATGGAAGCT
CCCGACTTTGGCATGCCCAACCAGACGCAGGCGTCTCACCAGCATCAGCAGCGGGTCCGT
GCCTCCAACCTCAGCAATCGTTTGAACCAGGCGCAGGGCCAGCAACAGCAGACGCCTTTG
TCGCAGTCGTCGCCGTTTGGAGTGTATCAACGACCGGAGTATAATTCGGACGCGTTGTAC
TTTGACAATATTCAGCTCGGGAGCGCCTCCCAGGCCTCCACCCCGGGCATTACATCACTT
CCTAGCTCCAACATGGGCACCCCACAGTGGGTGGAGCCCGCCTCGTTCGACTTCATGGGC
GGCATGGAGCAGCAGCAGCAGCAGCAGCAAATGGGCCAGCAGCAAATGGGCCAGCAGCAA
ATGAACCAGAATCTGACGGTGGCCATCAACCAAGGCCATCTTTCTAATCAGCGGTCACAG
TCCGTGGTGGACATGTCGCACATTTCGACGGCCCGAAAGCAGTCGAAATCCGGCACGTCC
ACACCCCGAGGACTGCCGCGCACCATGTCCACGTCCAACATCCCCCAGCAGCGCATCTCC
AAGCCCAAGACCAATGTCTCGTCAACCAATGTCAAGGCTGGCGCCAACACAGTTACGGCC
GACGACAAGCCTACGTCGTGCACAAACTGCCACACGCAGACCACGCCGCTGTGGCGACGT
AACCCTGAGGGTGAGCCGTTGTGCAACGCCTGCGGTCTGTTCCTCAAGCTCCACGGAGTT
GTCCGGCCTCTGTCGCTCAAGACTGATGTGATCAAGAAGCGAAACCGAACCAACGGAACC
AATGCATCTTCGTCGGGGACCGGTGGAGCCAGCACAAACACGCCTAGTCCGGACTCGGCC
AAGGAGACCGCGTCCACAGCCACTCGCAAGGGGGGATCCAGATCTCGTTCTCGGAAGAAG
GAGGAGGCGACCGTCAAGGGAGATACTGCGCAGAGCACGCCAACCCAGCCGTCGACACAA
GAATCGCCCGTGGGCATCGTCCCCAACAAGACGGATTCCGAGGAGCTTAAGATGTTTGGA
GCTGCCAACGTCGAGGAGAGAGACGGACAGTGGGAATGGCTGAGCATGGCTTTATAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D20482g_CDS-001

Protein length: 659 aa.
Product: Conserved hypothetical protein

>YALI0D20482g_CDS-001 MSFMPMDLDIGHDYIGSSGPFGNHMDYQTTNNHFVSSGASSNTSSLFTNTTSVESMSSFG
GGGFNTLKNDGLTQMNQPAAPVSAAAKRIGLSSDPSTDLAMVTNMWKMYSKAKYQLPNQE
RIANLTWRMMALDLKNCALQYHAKMAQKLHSKLGQNASVHRDSRVVMSAEMGLRQAAGGH
DNDDNDDTDSFDYMAHIKRLSESNRNRWAPQNNTTNTGHNSHNNHNHNEYTPSVNGGHMS
NSTLTSPSHVTSPITFTANDFHAPADYSQSLPATTFRRQSFMDDAPNAFHFSLDPLAMEA
PDFGMPNQTQASHQHQQRVRASNLSNRLNQAQGQQQQTPLSQSSPFGVYQRPEYNSDALY
FDNIQLGSASQASTPGITSLPSSNMGTPQWVEPASFDFMGGMEQQQQQQQMGQQQMGQQQ
MNQNLTVAINQGHLSNQRSQSVVDMSHISTARKQSKSGTSTPRGLPRTMSTSNIPQQRIS
KPKTNVSSTNVKAGANTVTADDKPTSCTNCHTQTTPLWRRNPEGEPLCNACGLFLKLHGV
VRPLSLKTDVIKKRNRTNGTNASSSGTGGASTNTPSPDSAKETASTATRKGGSRSRSRKK
EEATVKGDTAQSTPTQPSTQESPVGIVPNKTDSEELKMFGAANVEERDGQWEWLSMAL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG