YALI0D20350g

Overview

Description weakly similar to uniprot|P38724 Saccharomyces cerevisiae YHL047c TAF1 siderophore transporter for triacetylfusarinine C
Locus type CDS
Locus tag YALI0D20350g

Location

Species Yarrowia lipolytica Positions 2575559..2577475
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1917 (nuc.)
Previous locus YALI0D20328g Next locus YALI0D20372t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D20350g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D20350gYALI0D20350g_mRNA-001YALI0D20350g_CDS-001

Nucleotide sequence

 

>YALI0D20350g
ATGAATCTCAAGGAGCTGGACGAAAAGGCCAAGTATGTCTTTGACACCAAAGACCGGGTC
GCAGACAAGTTCTTCGAATCAATGTCCCCCAAGCCACGCAAGTTGATGAAGTTCCTCTTC
TCGCCAGACTATGACTACAGCTCTGCCACCGAGAACTTTGACCCCAATGACACCGTGGAT
GATCTGCAGCTGACCCATTCGGAAATCGTCCGAAAGGTATGGAATAAGAAGCAACTCATC
ATGGGCTGGGGCTTTCTGCTCTTCATGTCGCTGGTATCTACCATCATGTCCTCTTCTTTC
CCCTCTTACATTGTCTACGCCTCTTCCGAGTTCTCCCAGATGGGCGCCCTGGCTTCTGTT
CAGATTGTGCAGTCCTGTATCTTTCTCATCGCCCGGGCTCTGTGCGGTAAGTTGGCCGAC
AACTTTGGCCGGTTCGAGGCTATGTTCATCTCTGTTTGCTCTCTGACCGTCGGATGTGGC
CTGTACATGGGAACACACAACATTGTCACCTACTTTGCCGCCCTGGCCTTCTACTCCATC
GGAGACATTGGTATCCAGATGATGTACGAGATCTTTGCCGCAGACACCTGTGATCTGCGA
GACCGAACATTCTTCCAGACCATCACTCTGTTTGCCAACCTCTTCACTCCCTGGATTGCA
GGTCCCATGGTCCAGTCAATGCTCCAACACTCCACCTGGCAGTGGGGCATGGGAATGTGG
GCCATCATTGTGCCCGTGTGCTCAATTCCCTTCCTGGTGACTCTGCTCTATTTCCGAATC
AAGGCTTACAAGATGGGTCTGCGAATACGACGAGGAGACCCCAATCGAACCTGGTGGCAG
AACACCATCACCGGAATCATCAGAATGGATCTGCCCGGCCTGTGTTTCCTCTGTGCTGGT
CTCATTCTCTTCTTTGTGCCCATCTCTTTCTGTGCAGGTACAGACAACTGGAAGCAGCCC
GGAAACATTGCCATGCTGACGGTCGGCACCTTCCTGCTCTACGTTGCCTTCCCGCTGTGG
GAGTTCTTCGTCACCAAACACCCCTTTCTCAAGTACAAGCTCATGTCCAAGCGTCTGGTG
ACAATTCCCGGCTTCATCATTCTCTTCTACAACATGTCCTTTGCCATCTACCACCCCTAC
TTCCAGGTCTGGCTCCTGCTGGCCAAGGGTCTCAAGCAGGCAAAGGCCACCAACTTGCAC
ATGGCCATGTTTGTGTCACTGACCGGAACCACCCTTCTCTTTTCGCCGCTCATGCGATGG
CGAGCCAAGCTCAAGTCCGTCATGGTCTGGGGTACTATTCTGTACTTCATTGGAATGGGA
CTCACCTACGAGTTCCGAAAGCCCGAGAAACCCCTCCACACCATGATTCTGGCTCAGGTA
TTTGAGGGTGTGGGAGCCGGTCTGCTTGTCATTCCCGTCATGGTTTACATCCAGGTCGTG
TGCAAGCAGTCCGATGCTGCCGCCGCCATCACCGTCTACTACTTTTTCAATTCCACCGGT
ACCATTCTCGGTAACGTCATCTCGGCCGCTGTGTACCGAAACCATTTCCCCAAGCTGCTT
CGAGAAACAGGGTCCTTTACTGACCGGGAGATCCAGGCCATTTTCGGCTCCATCTACGCC
GGTCTCAGATACCCCGTGGGCTCCCCCCAAAGAGCGGCCATTGGAACCTCGCTCAACACC
GTCATCCGATCACTGCTCATCGGCCCTCTCATTCTCTGTGCCATCATGTTCTGCCTCTCT
CTGACCAACGCAGATATCAATCTCGATACCGCCCAGCGAATCAAGGAGGAGTCCGAGCAT
GTCAAGGCCGACGAGTCCACCGACGATAACGGACTGGTCGTGGAGACAGACTCAATCGAG
AAGCCGCCCTCCTACGACGAGAAGAAGCAAGTCGAGGAGATGGTCCAGAAGGCCTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D20350g_CDS-001

Protein length: 639 aa.
Product: Conserved hypothetical protein

>YALI0D20350g_CDS-001 MNLKELDEKAKYVFDTKDRVADKFFESMSPKPRKLMKFLFSPDYDYSSATENFDPNDTVD
DLQLTHSEIVRKVWNKKQLIMGWGFLLFMSLVSTIMSSSFPSYIVYASSEFSQMGALASV
QIVQSCIFLIARALCGKLADNFGRFEAMFISVCSLTVGCGLYMGTHNIVTYFAALAFYSI
GDIGIQMMYEIFAADTCDLRDRTFFQTITLFANLFTPWIAGPMVQSMLQHSTWQWGMGMW
AIIVPVCSIPFLVTLLYFRIKAYKMGLRIRRGDPNRTWWQNTITGIIRMDLPGLCFLCAG
LILFFVPISFCAGTDNWKQPGNIAMLTVGTFLLYVAFPLWEFFVTKHPFLKYKLMSKRLV
TIPGFIILFYNMSFAIYHPYFQVWLLLAKGLKQAKATNLHMAMFVSLTGTTLLFSPLMRW
RAKLKSVMVWGTILYFIGMGLTYEFRKPEKPLHTMILAQVFEGVGAGLLVIPVMVYIQVV
CKQSDAAAAITVYYFFNSTGTILGNVISAAVYRNHFPKLLRETGSFTDREIQAIFGSIYA
GLRYPVGSPQRAAIGTSLNTVIRSLLIGPLILCAIMFCLSLTNADINLDTAQRIKEESEH
VKADESTDDNGLVVETDSIEKPPSYDEKKQVEEMVQKA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG