YALI0D20306g

Overview

Description similar to uniprot|P47818 Saccharomyces cerevisiae YLR220w CCC1 involved in calcium regulation singleton
Locus type CDS
Locus tag YALI0D20306g

Location

Species Yarrowia lipolytica Positions 2570325..2571412
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1088 (nuc.)
Previous locus YALI0D20284r Next locus YALI0D20328g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D20306g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D20306gYALI0D20306g_mRNA-001YALI0D20306g_CDS-001

Nucleotide sequence

 

>YALI0D20306g
ATGGTTCTTGTCGCCCTTAAGAAGGCCATCTTTGGAACTGAAAAGCAGCCTCTCCTCCGA
AACAACGCCTCCTACGCCACCATGACCGACGAAGAAGCCCGCCTTGGTCTCACCGACGAC
GACACCCTGTCCCAGGGCTCGGGATCGTCTGGATCCGGAAACTCGTGGGTCTCTCCTCGA
GTTGTCTCCGACATGATCATCGGTCTTTCTGACGGCCTCACCGTCCCCTTTGCCCTCACC
GCCGGTCTGTCTTCTCTGGGAGACACCAAGCTTGTCATCACCGGAGGTATGGCTGAGCTT
GTCGCCGGAGCCATCTCAATGGGTCTCGGTGGATACCTCGCCGCCAAGTCTGAGAACGAC
TACTACAAGTCCGAGTGCACCAAGGAGCGAGCCGTCCTCAAGACCGAGTCCTCCGAGGGA
GAGTCTCAGATCGCCGACATCCTCGCCCAGTACAACCTCTCTCCCGAGACCACTGCCTCC
TTCACCAAGGACCTGCAGAAGAACCCCACATCCATGGTTGACTTTATCATTCGATTCGGA
AAGGGTCTCGAGGAACCTGCTGAGGGCCGAGAATTCACCTCTGCCATGACCATTGGTCTG
GCTTACTTCTTCGGAGGTTTCATTCCCCTGATCCCTTACTTCTTTACCGCCCACGTCGAC
GATGGTCTCATGTGGTCCGTCATTGTCATGCTCATCACCCTCTTCATCTTCGGTTGCACC
AAGACTGTCATCTCTCTTGGATCCGACGTCGGACGAGGCTGCATCACGTGGAATGGTATC
CAGATGACTCTGATTGGTGGTCTTGCTGCCGGAGCTGCATGGGGTCTTGTCAAGCTGATT
GAATAATCCTTGACTTGCACTCCCAACCCAAAAAAAGCAGACCGCGGACGGCGGGCACCA
CCATCACATACCCCCTATACACTTGGCACTCAGGACTGCCAGCAAAGTGGACCCCTTGAA
TTGTCTTAGGACCGTTTGTTTTCCTTGCGAAAGCAAACATTGACGTTACGTCCGCGCTCC
TAGCGCCGTGCAAACTCTCTTGCACATTCTATTTATTGTTCTGCAGTTTATTTATTGATA
TTGTATCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D20306g_CDS-001

Protein length: 282 aa.
Product: Vacuolar Fe2+/Mn2+ transporter, putative

>YALI0D20306g_CDS-001 MVLVALKKAIFGTEKQPLLRNNASYATMTDEEARLGLTDDDTLSQGSGSSGSGNSWVSPR
VVSDMIIGLSDGLTVPFALTAGLSSLGDTKLVITGGMAELVAGAISMGLGGYLAAKSEND
YYKSECTKERAVLKTESSEGESQIADILAQYNLSPETTASFTKDLQKNPTSMVDFIIRFG
KGLEEPAEGREFTSAMTIGLAYFFGGFIPLIPYFFTAHVDDGLMWSVIVMLITLFIFGCT
KTVISLGSDVGRGCITWNGIQMTLIGGLAAGAAWGLVKLIE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG