YALI0D20064g

Overview

Description weakly similar to uniprot|O94343 Schizosaccharomyces pombe Putative MSF transporter
Locus type CDS
Locus tag YALI0D20064g

Location

Species Yarrowia lipolytica Positions 2529127..2530611
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1485 (nuc.)
Previous locus YALI0D20042g Next locus YALI0D20086g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D20064g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D20064gYALI0D20064g_mRNA-001YALI0D20064g_CDS-001

Nucleotide sequence

 

>YALI0D20064g
ATGTCACGGTTCGATATCGACGAAACAAAATCCAAAACAGACGACTCCAACGGCTCCCAG
CCTCTGTACTGGAGCACATGGAGAAAGCAGGTGAACTTCGCCTTTGTCGCTCTCTTCACT
CTCACATCTTTTGCAACAATGTGTCAAGCATCCGTTGTCTGGGGACCCCAGACAAGGGAT
CTGGGCTGGCAGTTTGAACAGCTCAACAGAGGCTACGCTTTTAGCATAGCTGGCCAGGGT
TTGGGGTGTCTTCTGATGATCCCCGTGGCCATCAAATTCGGAAGACGGCCGGTCTATCTC
TTTGGTGTGGCTCTGTCATTGTGCACTTCGCTGTGGCAGGCGCAAATGACGTCTCTCCAT
GAGCTGTACACAGTTTCGTTTTTAGAAGGCATGGCTGCCAGTTTGACCGAGGCGTGTGTC
CAAATGACGATTGCAGACCTATTCCCGGTCCAGAGCAGAGGCACCTACAACGGCATGTAC
ATCATTGCAGTTTCGGTGGGCAACTTTCTCATTCTGGTGCCTGCTGGAGCCATAGTCAAC
CAGTGGGGCTGGAGAGCTGCGTACTGGGCGATTGGCCTGTTTCAGATGGTCGAGTTGGTT
GCATCTTTGTTTCTGTTTGAAGAAACTAAACCTGGCCATGTGTCTGGTCAAAAGTTGAGC
ATATATCCTCGGTCATCTTCAAAGAGTGACGAAGAGGAGAGAGAAACATTGGTTAACGAC
ATGGAAAGACACAACTCGTATGATACCGAGAGAAGCGCGTCCAGAGGATGCATCAAGTGC
ACCGACTCGTTTCCACATATCCCGTTGGTCACAGTTACTCCTGGCTGGTCGAGTTTCTTC
AAGTCTTTCTACACTCCGTTTGTCCTACTGGCTTCGCCCATTGTCGCGTTTGCCGCAATC
ACCTATGGATTTTTGCTGCTGGCTCTGTCAATGTCGTCGGTAGTGACTTCTCTCAAGTTT
GCAGAAGCCCCCTATAGCATGAGTCCCTGGTCCATTGGTCTGGTGTTCATTTCTCCGTTT
GTGGGCATGACCATGGGCTCCTTTTTCGGCGGGTACTTGTCTGACTGGGACATTGTGCGA
AGAACAAGACTCAACAGTGGCGTCTACAGTCCACAGATGCGACTGAAACTCATCTACCCA
GGTCTATTGGCCGTCACGGCAGGTCTGCTAACTTTTGGCATCTCGGTGTCAAGAGGAGTT
CATTGGGTGGTGCCAACTCTTGCGTTTGGAGCTGTTTCTTTCGGATTTGGAAGCGTGGGA
TCCATAGTATTGACCTATCTGATCGACTACAAGGAGTCTCTGGCTGCTCAGTCTCTGGTT
GCTGTTGTGGTGGTCCGAAACTCCATCTGTATGGTGGAGTCCTTCTCCTTGTCTCCGTGG
GTGGATTCGGTTGGGGTTGACAATGTGTTCATCACAGCGGGCTGTTTCTCGCTGATCCCC
ATCTTTTTGGCATTGGCGATTGAGCTGTTTCATCGCAAGTCTTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D20064g_CDS-001

Protein length: 495 aa.
Product: Conserved hypothetical protein

>YALI0D20064g_CDS-001 MSRFDIDETKSKTDDSNGSQPLYWSTWRKQVNFAFVALFTLTSFATMCQASVVWGPQTRD
LGWQFEQLNRGYAFSIAGQGLGCLLMIPVAIKFGRRPVYLFGVALSLCTSLWQAQMTSLH
ELYTVSFLEGMAASLTEACVQMTIADLFPVQSRGTYNGMYIIAVSVGNFLILVPAGAIVN
QWGWRAAYWAIGLFQMVELVASLFLFEETKPGHVSGQKLSIYPRSSSKSDEEERETLVND
MERHNSYDTERSASRGCIKCTDSFPHIPLVTVTPGWSSFFKSFYTPFVLLASPIVAFAAI
TYGFLLLALSMSSVVTSLKFAEAPYSMSPWSIGLVFISPFVGMTMGSFFGGYLSDWDIVR
RTRLNSGVYSPQMRLKLIYPGLLAVTAGLLTFGISVSRGVHWVVPTLAFGAVSFGFGSVG
SIVLTYLIDYKESLAAQSLVAVVVVRNSICMVESFSLSPWVDSVGVDNVFITAGCFSLIP
IFLALAIELFHRKS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG