YALI0D19888g

Overview

Description similar to uniprot|G3APF4 Spathaspora passalidarum hypothetical protein SPAPADRAFT_152618
Locus type CDS
Locus tag YALI0D19888g

Location

Species Yarrowia lipolytica Positions 2514400..2515592
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1193 (nuc.)
Previous locus YALI0D19866g Next locus YALI0D19910g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D19888g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D19888gYALI0D19888g_mRNA-001YALI0D19888g_CDS-001

Nucleotide sequence

 

>YALI0D19888g
ATGTTCGGACAGCTGATTATCGGACCGCCAGGGTCGGGAAAATCGACCTACGCCTATGGA
ATGTACCAGTTTCTCAATGCCATTGGTCGCAAAGTCTCAGTGATCAATATGGATCCTGCC
AACGACCATGTCCAGTATCCGTGCGCTTTGGACATTCGAGACTTTGTGCAGCTGGAGGAT
GTCATGACGGAACAGAACCTGGGACCCAATGGAGGCATCATGTATGCTTTGGAGGAGGTG
GAGACGGATGTGGACGGGTTTGTTAACAAGATCAAGGAGCTGGGAGACAATGAGTACCTG
CTGTTCGACTGTCCCGGCCAGGTGGAGCTGTTTACACATCATGGCGCGCTGCAGAGGATA
TTCAAGCGGCTGGAAAAGCAGGAGAAGGCGCGTCTCTGCGTGGTCAACCTCGTCGATTCG
CATTACATCACCAAACCATCTCTTTACGTGTCAGTCTTGTTGCTCACTCTGCGATCTATG
CTTCAGCTCGATCTGCCCCAGGTGAACGTGCTGAGCAAGATCGACTTGATCCACCGCTAT
GGAACGCTCGACTTCAACCTCGACTATTACACAGAAGTGCAGGATTTGCACCACTTGTTC
CCTCTGCTGGAAAAGGAGGCAGGAATGACCAAGTATGCCAAGCTGACGGAGGCTATTGCA
GAGGTAGTTGAAGACTTCGGTCTGGTAGCCTACGAGGTGCTGGCGGTGGAGGACAAAAAG
AGCATGATACAGCTGCTCACAACTATAGATAAGGCGACAGGCTACTTGTTTGGAAGTACC
GAGGTCGGCGGAGACTCGTTCTGGGCGGAAGCAACTCGACAGGGAGGATATGTGGGTGGA
GTTTCTGATATCCAGGAACGGTGGATCGATTACAAGGACGAATACGATGAGGAAGCGCGA
AAGGAGCACGAAGAGAAGCTCAAGGAGGCAGAAGAGGCCACTAGACCTTTGACTGCGGAC
GAAGAGTGGGAGCAGGCTCTACAGGATTATGAAGAGGGTATGGGAGGTCCTGCTATTAAG
CGGGAGAACAAGTGAGAGCCGTCCGATACTGCATTTCTTATGAGGCCATGTGTGCTTTCT
ATGAGTGCTCCACCAACTCTATGAGCTCTCAATGGGCGTCCTAGAACCCATGAGTCATGA
ACAATAGTTCGAACTAGAGCTGTATTATATTATTAATGTATTGATTTAAAAGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D19888g_CDS-001

Protein length: 345 aa.
Product: Conserved hypothetical protein

>YALI0D19888g_CDS-001 MFGQLIIGPPGSGKSTYAYGMYQFLNAIGRKVSVINMDPANDHVQYPCALDIRDFVQLED
VMTEQNLGPNGGIMYALEEVETDVDGFVNKIKELGDNEYLLFDCPGQVELFTHHGALQRI
FKRLEKQEKARLCVVNLVDSHYITKPSLYVSVLLLTLRSMLQLDLPQVNVLSKIDLIHRY
GTLDFNLDYYTEVQDLHHLFPLLEKEAGMTKYAKLTEAIAEVVEDFGLVAYEVLAVEDKK
SMIQLLTTIDKATGYLFGSTEVGGDSFWAEATRQGGYVGGVSDIQERWIDYKDEYDEEAR
KEHEEKLKEAEEATRPLTADEEWEQALQDYEEGMGGPAIKRENK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG