YALI0D19866g

Overview

Description similar to uniprot|W3XFR9 Pestalotiopsis fici hypothetical protein PFICI_02879
Locus type CDS
Locus tag YALI0D19866g

Location

Species Yarrowia lipolytica Positions 2511945..2514303
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2359 (nuc.)
Previous locus YALI0D19844g Next locus YALI0D19888g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D19866g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D19866gYALI0D19866g_mRNA-001YALI0D19866g_CDS-001

Nucleotide sequence

 

>YALI0D19866g
ACACACACACACACGCTAGTAATGGCCGGACACATTTCGCACTCGGCGTCGAACGCCATC
ATTTACTGCGTACTATGTTTCTTTCTGGTGATGGGTCTGGTAGTGGGCTACATCCACATG
CGTCAGAAGAAGGGAGGCTTTCTGTCTGCTAACAATACCCGAACAGCCATTCCGTTAGCG
ATTAATTTCGTCGCTTCAGGTGAGTATCGAGAGGAGGACTTGTGGAGTTGAGGGGAAGGG
GGTAGGGTGGTTCTCTGTGGTTGGGGTCCTGAGTTAGGGTCCTGAGTTGGGGTCCTGAGT
TGGGGTCCTGAGTTGTAATGTCGACGGATCTGGTGGTTCGACGAGATCTGATGCATCGAC
ATGATCTGGTGGATGGTGTGGTGCTATGTTGTGAGCAGGTGATTTGATATGCGGGTTTTC
ACTGGATGGTCTTGTGGTGTCCGTGGTGTTGCCCATAGACGTTCTCTACCATCTGCATGT
CTCATTAATCTGTCGTCAACAACAAGCTGCGCGGCTGAACAAAGCTGATATCATGGGTTC
ACTGCTGCAGCTCCTAGCGATCGCCTCACTACCCTTCTTCCTCCACGCACTGCGGGTGCT
TGCTTCGTCAGGCTGAGAAAACACCGCCGAACTCGACCAAGATAATACTTGCGTGAGAAA
GTGCACATTCTAATTAACCCAGCCATGGGCGCTGGAGTGCTCAATACATATCCAGATATC
GCCGTGCGGGCCGGAGTCGAGGGTCTCATGGTATATACCATTTCTTCGGCCCTTCCCATG
ATGCTTTTCGCATGGGTCGGACCTATTGTTCGTCGAGAATGTCCCGACGGGTTCGTTCTC
ACAGAGTGGACCAGATACCGATACGGATGGCTCACCTCGTTCTACCTCTCGTGTCTGACC
ATCGGAACCATGTATCTGTATATGGTGGCTGAGCTGTCTGCCGTTCAGGCTGCTATCGAG
ACACTGGCCGGAGTTGACGCTCTACCCGTTCTGATTGTCGAGGCTATTTTTACTTCCATC
TACACTGCTGTTGGTGGTTTCCACACCTCCTTCTTCACTGATAACATTCAAGGAGGAATG
GTTTTGATTCTGCTGATCATTGTTTGTGTCGGTCTGGGTGTCTATTTCCATGTTGATCCT
TCCGAGCCCAAAAAGTCCGGTATGCTGGAGCCCAACCTGCTCGCCAACAAGCTCATTTAC
ATTCTGCCTGTTGCCATTGCCACCAACGATTGCTTTTTAAGTGGTTTCTGGATGAGAACT
TTCGCTTCCAAGAACAACCGGGAGCTCTTCTGGGCATGCGCCATCGCCACTGTGCTGACT
CTTGTCATTCTGACTGTTCTGGGTCTCACTGGTCTGCTGGCTGTCTGGGCCAAGATGGTT
GTTGATGGAGAGCAGTTTGTGTACGGAGACGAGCGATCCGCCAACGCCTTCTTCTACGTG
CTGTTAGAAATGCCTGGATGGGTTATTGGTTTCACCATTGCCTTCACTCTGTCTCTCTCT
GTCGCTGCCTACGACTCCAACGTCTCTGCCATGGCCTCCACTATCTCCAATGACTTCTTC
CGAAACAAGGTGCCAATGGTCTGGGTGCGACTTATCGTGCTGTGCATCAACGCCCCTGTC
ATTGTCGTTGCCATCAAGGCCCCCAACGTTCTGAACATTTTCCTGATTGCTGATCTCTTC
TCGGCCGCCGTCATTCCCATCATGTTTTGTGGCCTGTCGCGAAAGATGTACTTCATTACC
GGCTGGGAAGTCATTGGAGGCGGTTTCGGAGGTATGATAACCGTGTTCATCTTCGGATCC
ATCTACTTCAAGAACGCCCACGAGGGAATCAAGCTGCTTATTCTGCTTCAGGGTCTGTAC
GGAGACGATTGGTCTGCCTTTGGGGCCTTTGTTGCTGCTCCCGTGGGCTCCATTCTGTGG
GGTTTCGGTATCCTTATCATCCGTCTGACGGTGCTCAAGATCTACTCCATGATCTCTAAG
AAGCCATTCACAGCTCTGGATAAGCCTGACCCCACTCAGACCGGTATGTCTGTGCTCAGA
GACGCTCCTCATGTCGACGCAGACACAACATCGGAGTCGGTGGTGCTCGACAGAAAAGAC
CCCACCATCATGCCCGAGCTGATGGAAATCCACGACGAGGGCGGACATCTGACTGACGCT
TTCCATCTCGACCTCGAAAACGAATTCCACCTTAACGACCACCATATGCATCTCCACCAT
CGGTCGCACGGTGCGCATCATGATCCGGGTGTTATCCCATGAAGAAAAAATGTATAGTAT
TCCAGATTCGTGGTGGTCCTAGAGACACTCTTTTAATGCCCTTATTTAAGTAACAAAATA
GATTCAGGAGATTCAGGGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D19866g_CDS-001

Protein length: 586 aa.
Product: Conserved hypothetical protein

>YALI0D19866g_CDS-001 MAGHISHSASNAIIYCVLCFFLVMGLVVGYIHMRQKKGGFLSANNTRTAIPLAINFVASA
MGAGVLNTYPDIAVRAGVEGLMVYTISSALPMMLFAWVGPIVRRECPDGFVLTEWTRYRY
GWLTSFYLSCLTIGTMYLYMVAELSAVQAAIETLAGVDALPVLIVEAIFTSIYTAVGGFH
TSFFTDNIQGGMVLILLIIVCVGLGVYFHVDPSEPKKSGMLEPNLLANKLIYILPVAIAT
NDCFLSGFWMRTFASKNNRELFWACAIATVLTLVILTVLGLTGLLAVWAKMVVDGEQFVY
GDERSANAFFYVLLEMPGWVIGFTIAFTLSLSVAAYDSNVSAMASTISNDFFRNKVPMVW
VRLIVLCINAPVIVVAIKAPNVLNIFLIADLFSAAVIPIMFCGLSRKMYFITGWEVIGGG
FGGMITVFIFGSIYFKNAHEGIKLLILLQGLYGDDWSAFGAFVAAPVGSILWGFGILIIR
LTVLKIYSMISKKPFTALDKPDPTQTGMSVLRDAPHVDADTTSESVVLDRKDPTIMPELM
EIHDEGGHLTDAFHLDLENEFHLNDHHMHLHHRSHGAHHDPGVIP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG