YALI0D19778g

Overview

Description weakly similar to uniprot|Q96U77 Neurospora crassa Conserved hypothetical protein
Locus type CDS
Locus tag YALI0D19778g

Location

Species Yarrowia lipolytica Positions 2500477..2504517
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 4041 (nuc.)
Previous locus YALI0D19756g Next locus YALI0D19800t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D19778g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D19778gYALI0D19778g_mRNA-001YALI0D19778g_CDS-001

Nucleotide sequence

 

>YALI0D19778g
ATGTCGAAACAACCGCCGGCTGTGGGGAAAAAGCCCGAGGGGCTCAAAACGGAGGTTGCG
GCGTCCAAAATCGAGAAATCAAAGCCCGAAATCCCCCCAAAGCCAGGAAAAAAGCCACCG
AAACCGCTGCCAAAGCCCGAAACTGCCAACAAACAGGAACAGACGAGCCCACAAAGACCA
AAAGTGGCGGCCAAGCCGGTCCACCTAAGCGGAACGTTGCGCGATCTCCAAATCGCCCCG
ACGATCGAGAAGACGGACCCAATCTCACCCAAACAACACGTGCACAGAACAGGTCCTCCA
GACACCCCAAAACGAGACTTTCTGAAACCACAACCGCCACCATCGCGCGAGCAGTCACGG
GAGCGAGGCAACATCCAGCTGGACAACTCCCACGACCAATTGGGACCCCGTGACCCCACC
ACACCGCTCAGATCACCTACCCGAAGCCCAGCAAGAAGCCCGGCCCCTCCACCACCAAGA
TCTCGCGACGTGAGTAGAGCACGTGATCTCGCGACAGGTTCGGGACCCTCGTCACGTGAT
GTCTCGATGTCTAGTGACTCGAAATCCTCCTCAAACTCCGATCTCGGAGGGCCGCTGTTG
CTGCCGCCGGGAGCAAGAGAAGGAGCTGTGGCTCCGATAACTGCTTCTACACCTGCAAAG
TCACGTGAAGTGTCGGAAACCCTGTCACGTGAAAACATGGTGCGTGATGACTCGCCTCGA
GGAAGAGTAGTTACACCCCACGTGACCAAACGAGAGGGAGCTATTGCGCCTTCATCTTCG
CGGGTCCCGTCAATTGTGGAACCCCAGTCTCCCTTGACAGTCAGAAAATCACGCGACACC
CACGTGACCACACCCGAGCAGATCCGAACGTCCAATCACGTTAGCCAATACACGCCCCCA
GCTCCGGCTGATCGGGTGGCCTCGTCTTCATCATCTTCTTCGACTTACACACCTCCGGCG
CCTCCGAAATCGCATATACCCAATTTGGAGTCGCCTAGTATTTCTCGAGACTCTTCTGTT
GTGCCAATGACTGTTTCGCGTGATTGCTCTGTGACTCCGGTTGCAGTTACACGTGAATCC
GTCGCTCCTGCACCTGTGGTTGTTTCACGAGAAAGTGCAGCTCCTCCTATTCGAGAGTCA
TCAACGCCTCCGGTGGCAGCAGCAAATGATCCACAATCTGCTCCTCCTGCAATTACCCCA
GCTGCCGTGGTGCGTGATCCTCCAGCTTCTGTAGGGTCCCCAGCTCCTGGGGTAGCTCCA
ACAGTAGCTACACATCCGCCGCCTCCCACACGTGACGTTGCGTCTTCGTCATCTGGATCT
CGTGATTCTGTGACTTCTCGTGATTCAACTGTCGCTCCCTCTGCTCGGAAACCTCTACCA
GACCCTTCGTCGTTTGCCGCCCCTCCTGTTCATCATGCGGTGGTTTCCAGACGAGAAGAG
TTGAAGAGAGAGGAAGCTCAGAGCCATATCCCTGTTTCTGCCTCGTCTGGCGCCCCTCCT
GCACTTCCTAAAAGACGAGAAACATTCAATGATGCAATGGAACCACGAGATATGGATTAT
CCCCCTCCTCCTCGACGAGCTACAGAGTCTTCCAGCGCTCCCCGCTTCTCCCGTCAGTCT
AGTTCTGCGAGTATTGACTCACGTGAGCCCTTGTACAAGGACCGGCATGGATCTACAGCT
TCTGTGGATCACTTGAGACACGCTGATAGGCCCAGACAAGGGTCGAGTGCATCTCTTGCG
TCCATGGAACGTCCGAGACAGGACTCTGCGACCGCTGAGAACAGCGACGGTATGTACAGC
TCCAAGTCTGTTCTCAATAGTCATTTGGAGCCTCCTCCAACTCGTCAGACTGTCATGACT
TCTGAGACAGGGGAGTTGGACAATGAACTTAACCCTTCTGCCGCCATTGACGGTTACCAG
GATTACCCCGACTCTTCTAACGTCAATAGAAAGCCCCCTGTTAACCCCAGACGTGCCCAG
TGCTCTCTCAAGCATGATGTCAAGTGTATGGACTGCAACGACGAGTATCTGGTGGCTTGC
AGCAGTGGTTACACGTTTGTCCTCAGTGCAGACAGTCTTGAACTGTTGTTTTCCGAGCCC
CATAATGATCTCAAGATCCATACTGTCAAAGTCACTTCTACCAACCACGCGATTCTCGGG
TTCAAGGAGGGAGAGCTTTGGGAGGTTGATCTGGACGACGGCACTGTATCTGTTAAGAGA
TCCACTTCTCACAGCACTCCCGTAGTGCTTATTCACGAATCTCCTAACGGTCTGTATACA
CTTTCTGAGGACGGCAGAATTTGTGTGTGGCCTGGAGACGATGAGTCACCTTTGTGTGGC
ACACCCAGGCAGCATAAGCTCTCGTTTGGTTTCATCCGTCAGGCAGTGGGAGTTCAGGAT
ACCATTTGGGTCGGCAAGAGCCGAAATGCATTTGTGTTCCATGAGTCTATGAACTTCATG
AATCCTTTGGTTGTGTCCAGCACTGTTCCTGGCAACCGACCCAGTCTGGACTTCTCATGC
ATCTTTTATGATGCTGGAAACGTGTATTTTGGTCATGAGAACGGAAATATCACCGTCTTT
AGCACTGCCACGACCCAGGTGGTTGCCCAGAAGTTTGTTTCGCCCTCTTGTCCGCAGACG
GTCTATTGCAACAATGGAATGCTTTGGATCGGGTTCAAGAACGGTTCAATTCAGATTGTC
AACGTGCGAGAACCGCAGTGGAAGATCATCAAGTCATTTGAGGGTCATCAGTCAGGAGTT
TCCGGAATTGTTGGCAGTTACAAGGCTGTGACGTCTTTTGGAAGTTCTCCCAACCTCAGA
TTTTGGGATGCTACTCTTCGGGAGTTCTGGGAAGATGACTTTATGTCTCAGCGACAGGAG
GAGTATTGTGACTACCACAATCTTTCTGTGGCTGTGATTACCTGGAACTGTGGAGCTCTG
AAGCCGTCACAAATGCAGAGAGCGAAGAAAAACGACAAGTACTGGATCGATCAGGTTCTG
GAGGATGCAGATTACCCCGATATTGTTGTGTTTGGGTTCCAGGAGCTGGTTGAGTTATCA
GATAAGGGTCTTTCGGCCAAGGCTCTACTTGGATTGCATAAGAAAGATGACATTTCGGAC
CAGTACCAGCTGTGGGAAGATGAGTTGTGCCACCTGATGGGCAAGGAGTACCGACGAGTG
AAGAGCCATTATCTTGTTGGTCTTTTTTCAATCGTGTTTTCACGTGACGACCTACGCTTG
GGTCACGTGCAATGTGGAGAAGTCAAGACCGGCCTTGGCGGCTACCACGGCAACAAGGGA
GCTGTGTGCATTCGATTCACTATTGCCGACTCGTCCTTGTGTTTTGTGAACGTTCATCTT
GCCGCCGGTCAGTCCAAGGTGTCTGATCGAGTCAAGGACTTGGAGAGCTGTTTCAGCAAG
GAACTTTTCAAGAAGGATTCTTCACGTGATGAAGATGGAACACGGGTGTATATCAATGGG
GGTGACGGTGCTCTTATTGGTGACCACGAGAATCTGTTTATTCTGGGCGACATGAACTTC
CGGGTCAACCAGCATCCCAAGCTGGCTGCTCAGCACGTCAACAACAACCGGCTGGAGAAG
TTGCTTCTCAGCGACCAGCTGACGATCCAGATGAAGAAGAACATTTCTTTCCCTCTCAGA
TCGTTCGCCGAGCATGAGATTTCCTTCGCGCCTACCTACAAGTTTGATGTGGGCACTGAC
ACATACGACTCTAGTGAAAAGAAGCGAGTTCCTTCGTGGTGCGACAGGATCTTGTACAGG
GGTCATGTTGACTGTTTGAAGTACGATTCTAAGGTGGTACGTCTGTCCGACCATCGTCCT
GTCATTGGCCAGTTTGATGTCAAGGTCAAGCGGATTGATGCTGATAAGTACGAAAGGATC
AGAGCCGAGGTCAGGCAGGAGCTCGACAAGGCTGTATATTAATTTATTCGATGATTTTTA
GTTAGATGAGAGTATAGGACACGTGACTGTTCGACAATCTCACCGGGTGTTACAATGTTA
CAGACAACCATTGACTTCTTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D19778g_CDS-001

Protein length: 1314 aa.
Product: Conserved hypothetical protein

>YALI0D19778g_CDS-001 MSKQPPAVGKKPEGLKTEVAASKIEKSKPEIPPKPGKKPPKPLPKPETANKQEQTSPQRP
KVAAKPVHLSGTLRDLQIAPTIEKTDPISPKQHVHRTGPPDTPKRDFLKPQPPPSREQSR
ERGNIQLDNSHDQLGPRDPTTPLRSPTRSPARSPAPPPPRSRDVSRARDLATGSGPSSRD
VSMSSDSKSSSNSDLGGPLLLPPGAREGAVAPITASTPAKSREVSETLSRENMVRDDSPR
GRVVTPHVTKREGAIAPSSSRVPSIVEPQSPLTVRKSRDTHVTTPEQIRTSNHVSQYTPP
APADRVASSSSSSSTYTPPAPPKSHIPNLESPSISRDSSVVPMTVSRDCSVTPVAVTRES
VAPAPVVVSRESAAPPIRESSTPPVAAANDPQSAPPAITPAAVVRDPPASVGSPAPGVAP
TVATHPPPPTRDVASSSSGSRDSVTSRDSTVAPSARKPLPDPSSFAAPPVHHAVVSRREE
LKREEAQSHIPVSASSGAPPALPKRRETFNDAMEPRDMDYPPPPRRATESSSAPRFSRQS
SSASIDSREPLYKDRHGSTASVDHLRHADRPRQGSSASLASMERPRQDSATAENSDGMYS
SKSVLNSHLEPPPTRQTVMTSETGELDNELNPSAAIDGYQDYPDSSNVNRKPPVNPRRAQ
CSLKHDVKCMDCNDEYLVACSSGYTFVLSADSLELLFSEPHNDLKIHTVKVTSTNHAILG
FKEGELWEVDLDDGTVSVKRSTSHSTPVVLIHESPNGLYTLSEDGRICVWPGDDESPLCG
TPRQHKLSFGFIRQAVGVQDTIWVGKSRNAFVFHESMNFMNPLVVSSTVPGNRPSLDFSC
IFYDAGNVYFGHENGNITVFSTATTQVVAQKFVSPSCPQTVYCNNGMLWIGFKNGSIQIV
NVREPQWKIIKSFEGHQSGVSGIVGSYKAVTSFGSSPNLRFWDATLREFWEDDFMSQRQE
EYCDYHNLSVAVITWNCGALKPSQMQRAKKNDKYWIDQVLEDADYPDIVVFGFQELVELS
DKGLSAKALLGLHKKDDISDQYQLWEDELCHLMGKEYRRVKSHYLVGLFSIVFSRDDLRL
GHVQCGEVKTGLGGYHGNKGAVCIRFTIADSSLCFVNVHLAAGQSKVSDRVKDLESCFSK
ELFKKDSSRDEDGTRVYINGGDGALIGDHENLFILGDMNFRVNQHPKLAAQHVNNNRLEK
LLLSDQLTIQMKKNISFPLRSFAEHEISFAPTYKFDVGTDTYDSSEKKRVPSWCDRILYR
GHVDCLKYDSKVVRLSDHRPVIGQFDVKVKRIDADKYERIRAEVRQELDKAVY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG