YALI0D19756g

Overview

Description weakly similar to uniprot|O14035 Schizosaccharomyces pombe NCS1 uracil transporter
Locus type CDS
Locus tag YALI0D19756g

Location

Species Yarrowia lipolytica Positions 2495998..2497794
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1797 (nuc.)
Previous locus YALI0D19734g Next locus YALI0D19778g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D19756g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D19756gYALI0D19756g_mRNA-001YALI0D19756g_CDS-001

Nucleotide sequence

 

>YALI0D19756g
ATGTTTCTGGAGAAATTCGCCCTGGAAGTTCCCCAGGGCGCCGCCTACGAAAACACCGTG
TGGACAAATCGCGACCTTGTCCCTATACCCGCGGAAAGACGCACATGGAACGCTTGGGGA
TACATTGGATACTGGACGGTCGGAGGAAGCTGTGTGACGGCCTGGACGTTGGGCTCGACC
ATGTTGGCCCACGGAAGCAATGCGCCGCACGCCATCGGGGCTTCTGTGATTGGAGCCTTT
CTGACGGGGCTTCTGGCGGTCGGAAACGGCCTCGTGGGAGATAGACACCATATTGGATAC
ACCGTGAGCTGCCGAGCAACGTTCGGCATGCGGGGCTCGTATATTCCCATCGTGTTGCGA
TGCTGTATCACATCTGCGTGGTTTGGACTGCAAGCATTTTGGGGTGGTCAGGCCGTCAAG
GCCCTGATCGGGTCAATGATCCCGGGCTTCATCACAGGCGACCTGGATAACCTCTTTTCC
GAGTCCTCACATCTCGCCAAGAACGACTTCATCGGCTTCTGGATATGGATGGTCTTCTTC
GTGTTCATCCTCTTCTTTCTGCCGCCCGAGAAGATGCAGGTCCCGTTCCTGTGCTCCTTC
TTGTTGCTCATGATGTCGTGTTTTTCATTGCTAGGATGGACCGTGGGGCTTGCGGGTGGC
GCAGGACCGCTCTTCTCTAAAGACTGGAAGCCAGAGGTACACAAAAACCGAGCTGTCGGC
TGGACAATGATATTCGGCGTATCTTCTGTTCTGTCAACATGGGGAACCGGATGTTTGTCC
CAGAGTGACTGGACTCGATACGCACGCCGACCTAGTGCTCCCCGCTGGTCGCAGATGCTC
GCTGCACCCCTCACAATCATCTTGACCGCCTCCATGGGCATCATTGTGACCTCTGCATCC
ATGGTCATCTTCAACGGCAAAATCTATTGGAACCCCATCCAGATGCTGCCCTTGCTGCAA
AAGCACCTCGACCACTCCGCCAAGTCACGAGCCGGCGTGTTTTTCATCTCTCTTGGCTTT
GCGGTCTCTCAGCTGGCCCTGGCTCTTGTTCTCAACTCTGTATCCACAGGTATGGATCTT
GCAGGACTGTTCCCCAAGTACATCTCCATCACCCGTGGAGCCGCCTTGATGGTCATTATC
GGAATCGCAATTCAGCCATGGCAGCTCGTGGCCAACTCTGCAAAGTTCCTGACGGTCCTG
GCAGCGTTTGGAGTGTTCATTGCTCCTATTACTGGTGTCATGATCGCTGACCTGCTCGTG
GTGCGACGAAACAAGTTTGTCATTTACGACCTTTTCCATACTATGCAATCAGAAGAGGAG
GAGTCTAACACTGCCGACGGTAAGTCGATCTACTGGTTCTTCCACGGCTTCAACGTGTGG
AATCTCATTTCCATCATCTTAGGCATGTGGCCCATGATTCCAGGGCTAGCCAATGCCGGC
ATCATGTCCTCAGATGAGCGACACTACAAGCATCCGGAGATCCCAGAGCCGCTGCCGTTG
TCGTGGAGACGAGTTTACAACATTGGCTTCTTTGTGGGCTTTGCCATCTCTTTCACAATG
ACCTGCGTCGGGGCCTTCATTTGGAAGCCTCCTGGGGTGGGTAAGCATTCGACATGGTGT
TCCGGCGACGAGACAGACTCGGACAAGGAGATGAGCTACGAGGAGCCGATGATGGAGGCA
GTGGAGACAAAGTAGGATCAGGATACAAGTAAGCATACTAACAGCGTTGCCAAGGAATCA
CCGAGGCACGTAAAACACTGGCGTTTAGCATTAATATATTATATTGATTTATTGTAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D19756g_CDS-001

Protein length: 565 aa.
Product: Conserved hypothetical protein

>YALI0D19756g_CDS-001 MFLEKFALEVPQGAAYENTVWTNRDLVPIPAERRTWNAWGYIGYWTVGGSCVTAWTLGST
MLAHGSNAPHAIGASVIGAFLTGLLAVGNGLVGDRHHIGYTVSCRATFGMRGSYIPIVLR
CCITSAWFGLQAFWGGQAVKALIGSMIPGFITGDLDNLFSESSHLAKNDFIGFWIWMVFF
VFILFFLPPEKMQVPFLCSFLLLMMSCFSLLGWTVGLAGGAGPLFSKDWKPEVHKNRAVG
WTMIFGVSSVLSTWGTGCLSQSDWTRYARRPSAPRWSQMLAAPLTIILTASMGIIVTSAS
MVIFNGKIYWNPIQMLPLLQKHLDHSAKSRAGVFFISLGFAVSQLALALVLNSVSTGMDL
AGLFPKYISITRGAALMVIIGIAIQPWQLVANSAKFLTVLAAFGVFIAPITGVMIADLLV
VRRNKFVIYDLFHTMQSEEEESNTADGKSIYWFFHGFNVWNLISIILGMWPMIPGLANAG
IMSSDERHYKHPEIPEPLPLSWRRVYNIGFFVGFAISFTMTCVGAFIWKPPGVGKHSTWC
SGDETDSDKEMSYEEPMMEAVETK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG