YALI0D19646g

Overview

Description similar to uniprot|P50276 Saccharomyces cerevisiae YGR055W MUP1 High affinity methionine permease
Locus type CDS
Locus tag YALI0D19646g

Location

Species Yarrowia lipolytica Positions 2490213..2491886
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1674 (nuc.)
Previous locus YALI0D19624g Next locus YALI0D19664t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D19646g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D19646gYALI0D19646g_mRNA-001YALI0D19646g_CDS-001

Nucleotide sequence

 

>YALI0D19646g
ATGTCAATTATCGACGGCATAGAAACAAGGAGAGACTCGGGCGCCTCCTCAGCGTCAGCA
GCGTCGTCATCTTCAAAAAATTCCATCTCAAAATCCCCAATCTTCACAACAGAATCCACC
CCCTTGGTGAGAGGAATTGTGGAAGGCAGGAACACCCACGACCCAGAAGCCGATGGAAAA
AGCGAATCTGTATCTCCTCTAGGTCGCCATGTGGGACCATTGACGGTTGTGGCCCTCAAC
TTCAGCCAGATGATCGGTACTGGCATCTTCGTGGCGCCAGGAACAATTCTCAACTCGGTA
GGCTCGATAGGAGCCTCTCTGGTTCTATGGATGTTTGGCATAGTCGTGTCCTTCTGTGGG
TTCTCGCTTTACACCGAATTCGCCTCTCTGTATCCCAGCAGATCGGGGGGAGAAGTGGTG
TATCTGGAAAAGGCATATCCACGACCCAAGTTCATGGTACCTGTGACATTTGCTATTTGC
ACAGTTCTTCTGAGCTACTCAGCATCAAACGCCATTGTCTTCGCTCAGTACTTTATGGTA
TCTCTTAACATCAAACATACAGACGGAATGGAGCAATTTGTGGCTGTGGCTACCTCTGTG
GCCGTCTGCATCATCGCTATTGTTGACACCAAGTGGTCCATGCGTTTGCAGTCGGTCATT
GCCTATATCAAGGTGGGAATTCTCATCTTCGTCGCAACCACTGGTCTGGCTGTTATTTCC
GGAGTCACCAAGATTGAAAAACCACTCGACAACTTCAAAAACCCATTTTCTGGAACTTCC
ACATCACCGAACGTCTGGGCTGCGGCTCTGGTGAAGGTAATTTTCTCGTTTGCGGGCTGG
AACAATGCCAATAACGTGCTTAATGAGATCCCCAACCCAGTTAAGACTGTCAAGATCTAC
GGATCAATAGCCCTTGCTCTGGTTTCGGTTTTGTACATGGTTTGTGCTGTTGGATACTTT
GCTGCAATCCCTAAACAGGAGATCAAAGACTCGAAACTACTGACTGCAGCTCTCTTCTTC
ACCAAAGTGTACGGAGATGAGTCGACAACAAGAATCTTGCCCTCTTTGATTGCCATCTCT
TCCTTTGGAAACCTCCTGTCTGTTACAATTGGACACTCTAGAGTCGTCAGAGAAGTAGGA
CGCCAAGGAGTCCTCCCCTATCCTGCCTTCTGGACAAACACTTGGGCATTTGGAACACCT
GCAGGACCTTTACTGGTCAAGTTACTGCTCACAATCATTGTCATCATGGTCCCTCCTCCA
GGAGACGCGTTCAACTTTGTTATCGACTTGCAGTCATATCCCAGCAACGTCTTCCTGGTA
TTACTGGTAATTGGTCTGTTTTTAATCCGGAAGCGAAGACGAACCCAGGGCCTCCCAAGT
GCACCTTTTGAGGCCTGGGATTGTGTTCTGTACCTCTACTTGGGAGTATCCCTCTTCCTC
CTGGTTGCTCCTTGGATCCCTCCTCCCGGAGGAAAGTACGGAGGAGATGTCTCGTTCTTC
TACGCGACCTATTGCATTGTGGGCATTGCAATTCTTGCTGTCTGTGGTCTCTATTACTTC
TGGTGGGCGGTCATCTGGCCCAAGCTCGGCAATTTCAAACATGTAGAGGTTCTTGAGCGG
CTTCCTGACGGTTCAGTGTTCACAAGAATTGTTAGACAGAAGAATTCTTTTTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D19646g_CDS-001

Protein length: 558 aa.
Product: High-affinity methionine permease, putative

>YALI0D19646g_CDS-001 MSIIDGIETRRDSGASSASAASSSSKNSISKSPIFTTESTPLVRGIVEGRNTHDPEADGK
SESVSPLGRHVGPLTVVALNFSQMIGTGIFVAPGTILNSVGSIGASLVLWMFGIVVSFCG
FSLYTEFASLYPSRSGGEVVYLEKAYPRPKFMVPVTFAICTVLLSYSASNAIVFAQYFMV
SLNIKHTDGMEQFVAVATSVAVCIIAIVDTKWSMRLQSVIAYIKVGILIFVATTGLAVIS
GVTKIEKPLDNFKNPFSGTSTSPNVWAAALVKVIFSFAGWNNANNVLNEIPNPVKTVKIY
GSIALALVSVLYMVCAVGYFAAIPKQEIKDSKLLTAALFFTKVYGDESTTRILPSLIAIS
SFGNLLSVTIGHSRVVREVGRQGVLPYPAFWTNTWAFGTPAGPLLVKLLLTIIVIMVPPP
GDAFNFVIDLQSYPSNVFLVLLVIGLFLIRKRRRTQGLPSAPFEAWDCVLYLYLGVSLFL
LVAPWIPPPGGKYGGDVSFFYATYCIVGIAILAVCGLYYFWWAVIWPKLGNFKHVEVLER
LPDGSVFTRIVRQKNSF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG