YALI0D19624g

Overview

Description similar to uniprot|P43586 Saccharomyces cerevisiae YFR001w LOC1 related to rabbit triadin SPP41P
Locus type CDS
Locus tag YALI0D19624g

Location

Species Yarrowia lipolytica Positions 2488134..2488767
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 634 (nuc.)
Previous locus YALI0D19602g Next locus YALI0D19646g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D19624g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D19624gYALI0D19624g_mRNA-001YALI0D19624g_CDS-001

Nucleotide sequence

 

>YALI0D19624g
ATGGTCCCCAAACGATTTCGAAAGGAGAACGCCGGCGCGCGAGAGGTCAAGAGTGAGGTT
TTCGGCGACAAAAAGGCTCGAAACCAGCTCGCACACACCTCGAAAAACTACGACAACGCC
AACGAGCAGCCCCGCAAGTTCAAGAACCGGGTGGCCAAGCCCAAAGACAACGGCAAGCCC
AAGGTCAAGAAGGCCCGAGTGTACACAGAAAAGGAACTGGGAATCCCCAAATTGAACACG
GCCATCGATCCCGAGGGAGCCAAGAAGGCACTGAGAGGCAAGAAGGGCAAGAAGTTTGTG
GATAACGACCAAATGAACCTGTTAGTTAGCATTGTCAACGAGAAGATTGACTCTCGAAAC
GCCAGTAAGCTGGAAAAGGCCCGTCAGCTGGAGATGATCCGAGAACAGAAGCGAAAGGAG
ATTGAGAAGCGAGAGGCTGAGAAGGAGGCCGAGATCGAGCAGAAGAAGAAGGAAATCAAA
AAGACCAGCCGAGGCAAGAGTGCTGACAAAGTGCAGAAGAAGATGGAGGAGCTCAAGAAG
AAGGAGGAGGGCAAGGGAAATTCCAAGAAGAAGAGCGTCAGCTTTGCTTAATTATCGGGA
GGTATATACTATATGCATTTGTTTATCTGGAGGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D19624g_CDS-001

Protein length: 197 aa.
Product: Nuclear protein involved in asymmetric localization of ASH1 mRNA, putative

>YALI0D19624g_CDS-001 MVPKRFRKENAGAREVKSEVFGDKKARNQLAHTSKNYDNANEQPRKFKNRVAKPKDNGKP
KVKKARVYTEKELGIPKLNTAIDPEGAKKALRGKKGKKFVDNDQMNLLVSIVNEKIDSRN
ASKLEKARQLEMIREQKRKEIEKREAEKEAEIEQKKKEIKKTSRGKSADKVQKKMEELKK
KEEGKGNSKKKSVSFA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG