YALI0D19382g

Overview

Description some similarities with uniprot|G3BCN3 Candida tenuis CANTEDRAFT_96280 hypothetical protein
Locus type CDS
Locus tag YALI0D19382g

Location

Species Yarrowia lipolytica Positions 2456188..2457677
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1490 (nuc.)
Previous locus YALI0D19360g Next locus YALI0D19426g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D19382g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D19382gYALI0D19382g_mRNA-001YALI0D19382g_CDS-001

Nucleotide sequence

 

>YALI0D19382g
ATGTCTGAACACGTGCCTGCCTGGAAAAAAGCCGGATTGGCTGTCGAGTCGGTGACCGAG
GATTCTGCCACCGCTCCCTCGTCCAACAAGCGAACTGCCGCCTCTCAAGAGAAGGACAAG
AAGCCTCCCAAGCGACAGAAGCTGCCCAAGGACAAGCGAGCTCCTCCTCCCGAGTCGGAC
CATCTTGTCTACATCAAGACCTTTGTTGACGACAAGCCCTCATGGAAGTTCAACACTGTT
TCTCAGCAGTGGATTCTCAAGAACCTGTTCAATGAGCTGGTCCCCTCAGACTACGACGAC
TATGTGCTCAAGTACGTGAGTACGGTCAAGGGTGGTGCTCGAGATCGAGTTTTGGACTCG
GCCAAGCAGATCATTTCCGACAATAACGAGTACGTCCAGTGGCTCAATGCCGACGACGAG
GAGGACAATGACGAGGACAAGATTGAGGAGGATGGGGAGAAGGAGGACAAGAAGGAGGAG
AACAAGGCTTCGAAGAAGCGAGTTCCTCGACATTTCGTCAAGCGAGCCCACGGTCTGATT
TCCGAGATGACCGGTGAGGAGCCTGATGTCGACTGGGAGCCCGAAAACGGAGAGGAGGTG
TCTACCAAGCCCGATTTCATTGTCCAGGATGTCAAGAAGCAGTACAACGAGGATTTCTCC
GAGAATACTGTCCCCCAGACCGACCTGGAGTCGTTTGATGAGGCCCAGAAGAACGACAAG
ATTCTTGACAAGGCCGTCAAGAAGATTGAGGAGCATGATAAGGAGGCCGCATCGAAGCAA
ACCAAGGCTCCCAAGCAGGATTTCATTGTCAAGGACGTGAAGGAGCAGTACGAAGAGGAT
TTCACCGAGGGTAAGCCCGAGGAGACCCCCGCCGAGGAGTTTGCTGCTGCTAAGAAGCTC
GACAAAGAGCTGGACCATGCCGTGGACAACCTGCACAAGGCTGAGGCCAAGGGCAAAGGA
TCCAAGAAGGACGCCAAGAAGGACAAGAAGACAAAGTCGCCCAAGCAGGATTTCATTGTG
AAGGATGTCAAGAAGCAGTTCGAGGAGGACTTTACTGAGGGTGTTCCCGAAGAGACCCCT
GCCGAGGAGTTTGAGAATGCCAAGAAGCTTGACGAAGAGCTCGATGAGGCTGTTGACAAC
CTCCACAAGTCTGAGGCCAAGGCCAAGGGCTCTAAGAAGGATTCTAAGAAGGAGTCCAAG
AACGCAAAGAAGACCAAGTCTCCGAAGCAGGACTTCATCGTCAAGGATGTAAAGAAGCAG
TACGAGGAGGATTTCACCGAAGGACTTCCCGAAGAGACTCCTGCTGAGGAGTTTGAGGAG
GCTGAGAAGAACGAAAAGATCCTCGACAAGGCCGTCAAGAAGATTGACAAGTCTCGAAAG
GCCAAGTCTGCTGCCAAGGATAAGATCAAGAAGTAGAGACGAGGAAATGAAGGAATGGTT
TTGTATTTTCTAGTTATTATTATTCAAAGAAATGATTGTTTTGTGATCAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D19382g_CDS-001

Protein length: 472 aa.
Product: Conserved hypothetical protein

>YALI0D19382g_CDS-001 MSEHVPAWKKAGLAVESVTEDSATAPSSNKRTAASQEKDKKPPKRQKLPKDKRAPPPESD
HLVYIKTFVDDKPSWKFNTVSQQWILKNLFNELVPSDYDDYVLKYVSTVKGGARDRVLDS
AKQIISDNNEYVQWLNADDEEDNDEDKIEEDGEKEDKKEENKASKKRVPRHFVKRAHGLI
SEMTGEEPDVDWEPENGEEVSTKPDFIVQDVKKQYNEDFSENTVPQTDLESFDEAQKNDK
ILDKAVKKIEEHDKEAASKQTKAPKQDFIVKDVKEQYEEDFTEGKPEETPAEEFAAAKKL
DKELDHAVDNLHKAEAKGKGSKKDAKKDKKTKSPKQDFIVKDVKKQFEEDFTEGVPEETP
AEEFENAKKLDEELDEAVDNLHKSEAKAKGSKKDSKKESKNAKKTKSPKQDFIVKDVKKQ
YEEDFTEGLPEETPAEEFEEAEKNEKILDKAVKKIDKSRKAKSAAKDKIKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG