YALI0D19360g

Overview

Description similar to uniprot|Q6C013 Yarrowia lipolytica YALI0F28633g
Locus type CDS
Locus tag YALI0D19360g

Location

Species Yarrowia lipolytica Positions 2453090..2456045
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2956 (nuc.)
Previous locus YALI0D19338g Next locus YALI0D19382g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D19360g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D19360gYALI0D19360g_mRNA-001YALI0D19360g_CDS-001

Nucleotide sequence

 

>YALI0D19360g
ATGGAGCTGTTTGTCCAGCAGGTTCTCGGGACCGTGAGTCTCAACGATCATGTGGACGAG
ATGCACGAGTACTACCGGTGCTTTTCTGGATGGGTTGCTCGGCAGCGGAAAAACTGGATG
GCCCATAACGTGCTTCCAGCTGCCATTTACCACGTCAAAATACGCCAACAGAAGACCAAA
GGAGACAGGATACATTTGTTGGAGACGCCCGAGGGACTGGCGGTTTCGGACAATTTGCTG
CCGTGGTTGGTGTTCGGGTGCCACGTGCTTCTGGACTACTCTACTGATGTGAAGGTCATC
TCTAAATTCTTGTCGCGGGCAGGCTTCCAGCTTTTACCAGATGATCTGATTGCAGATATT
GTTGCCTGGTCGAGTTACCCGGCTCGATTGACCATGACTGCGGGCGAGCAAGAGTTTTGC
TCACGCGTGTTTTCGCTGCTGGAGTCTTCTGAGCCCGATTTCTTCCCTTACTGCAAGTCT
GGATACATCAAGCACACCTGGCAGTTGCTCTATAACCATCATTTGCGCACTCCGAGCTTA
AACAACTTGGTGGATCAGGCTGGAATTGTTTACTTTGGACTCGTTCGGATCGAGAAGAGT
ATTTATTCGGTGGTCTTCATGGACGCAATGACCGAGGCGGTGGAGTTTTCGGATCTCATC
ACCACACATCGAGATTTCAAAAACCCCAGGGAGTTTGATCGCATGTCACAGGAGGTCTCT
GATTGTATCTGTGCCTTTTTGAAGAAATACGGCCATCCCAGATTTTTGGTCCTAGTCAAT
CCCTTGTCAAATTGGCTCTACTATGTTCTCAGCAGAGCAGTGAAGCACTTGTGGGTTCCA
ACCCATACCGAGTTTGTTGCTCCTGTTCAGAAGAGTGATACGGAGCCCTTGGTGTTGCAG
AAAGTCGAACCATTTCTAAGCGTGATTGCATACGTTCTATACAACAGAGATATTTCAGAG
ATACCTCCATTCAAACACCTCAAGTCAGAAGACTCGTCCTGGAGACTGACGTTTGCCACT
AACATCCACTGGGCTCAGAACCAAGTCTTTTCTTATCATCCCAAGACCCTGAGTGACATG
TTGTCACCAAGGCTGATTGTGGCTGAAATTCCGGGACTCAACCTGGTCAAGGCTGATCCA
ATTACTTTCCGGATGCTCAAGACCAAGCCTCCAAAGCGGTTCAATTGTGGCGACTGTCCC
TTAAGCTCAGCTACTCGCCTTGACAAGGCGAGTAGCGAAGTCTTCCAGGAACTGATGAAG
AAAAGCGAGCAGTTTAGTCTTAGTGCGGGGCAGAAACACGCCAATATCCTGATTGACAAT
GTGACCGAGAAGGTTTTAGTCTACTTGTATGAGCTGAGGGAGGCCGAGAAGCAAGGTGTT
TACGACGTGGCCACCGTTATGAGGCAGAGCAAGCTTACTTTCCAGTCCATGAATGAGGAT
GATCTCTTTTGGATTTCCCATGGCGTGGAAATAATGAAGAATGGGAGCTTTGGTCCTGCT
GAGGCCTTCAATGGCAATAGGTCGGAGTTTATTGATCCTAAGGATACCTCTGGACGTCAG
TTCCATTTGGCCCGCGAAACGAAACAGCTGAAACGGGAAGTAAAAGATGAAACCGAGATT
GACAGTGATGAAGAAATTATAGAAGAAGAGCCCACTGCGGCGGACGATTCGGACCCTGGG
GCAGAGCCGATGGTGGACGATGCAGGAGCTTCTGTTCCTGCGCTTGATCTGTCTCTTAGG
AGAACTCCTCGCAGGGCTGCTGAGATTGCTGCTGTCAAGGTCAGGCAGGCCTATGAGCGG
TACAAGAAGGTGCGTCGAGGTGTGTACATTGACAGGGAGGCACCCGAGACAGAGGAGGAT
ATGGTTTTTCCGACTGTTCGAAATCCTTCACCGACTGCCTCTCCAGCCAAAAAGAGAAAG
GTCGATTTCGGGGCTCATTTCAAACAACTTCGGTTGCTTGGAGAGATCGGTAAGGAGATG
AGTGCATCTATGGGTGATGAAGCTGTGGATGGTGATGCCGATGACCATATGGAGGATAAA
AATGTCAACATGGAAGCTGGAGAGGGGGATGGAGATGAAGATGAAGAAACCCACTCGGTA
GATGGAGAGGAGGGTGGTGAGAGTGAGAGTGGGAGTGAGAGTGGGAGTGAGAGTGAGAGT
GAGAGTGAGAGTGAGAGTGGGAGTGGAAGTGGAAGTGAGGAATCTGCGTCTGGATCTCGT
CAAGCCAGTCTTTCCGAACATTCTAACCCTCTTAACGCTGAAGCAGATCGCATGTTGGTT
CCTGAAAGTCCCCCATTCGAAGACGCAGAAAGAATCATTGTGGCAGAACAATCGAGCCCT
CTGTTTGAACGGGCAGGCCCTGTAGTTGCGGAGCCGGGAAGTCCTCGCTCTGTTGAGCCG
GTCCCTGTTGTTGTTCCGTCTGCAACACCTTCATCATCCACTTTTGTGAAGGACGAACCG
TTCAGCCCTCCTGCTATGCTAAAACTCGAACCCACTAGTCCCAAAGCTCACGAGTCATCC
CCAGATGTGCTGGCTGCTTATTCGGAGGATTTTTCCTATTTGGAGATCACAGACGATTGT
CCTGTTCAGAAAATGGTTGACGAGGATGTGCGCAACCATCCAGACGCAGAGTACTCCGTG
AAGCCTATCAGATTCAGAGGAACTCAATACCCTGACGGCAAGCTGGCGTACTCAAGTGAC
AGTGAGTCGGACTATGACTCTATGGACGGTGGCTACTCGGATATCGATTTTGGAGTGGAG
CGTGCTGAGAGGAAGAAACAGAGACGGGAACAGGTAGAATACACTCATGCGGACTTTCAG
CTGTCGGAAAATGATGAGGAGTGGACACCATTGCAGCCTGGCGACTTGGAGAAAGTGTAC
AACATTCTCAAATGGGGATGTGAAGATCACTCATAGCATATCTAATTTATATATATTTTT
GCATTATACTGTATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D19360g_CDS-001

Protein length: 972 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D19360g_CDS-001 MELFVQQVLGTVSLNDHVDEMHEYYRCFSGWVARQRKNWMAHNVLPAAIYHVKIRQQKTK
GDRIHLLETPEGLAVSDNLLPWLVFGCHVLLDYSTDVKVISKFLSRAGFQLLPDDLIADI
VAWSSYPARLTMTAGEQEFCSRVFSLLESSEPDFFPYCKSGYIKHTWQLLYNHHLRTPSL
NNLVDQAGIVYFGLVRIEKSIYSVVFMDAMTEAVEFSDLITTHRDFKNPREFDRMSQEVS
DCICAFLKKYGHPRFLVLVNPLSNWLYYVLSRAVKHLWVPTHTEFVAPVQKSDTEPLVLQ
KVEPFLSVIAYVLYNRDISEIPPFKHLKSEDSSWRLTFATNIHWAQNQVFSYHPKTLSDM
LSPRLIVAEIPGLNLVKADPITFRMLKTKPPKRFNCGDCPLSSATRLDKASSEVFQELMK
KSEQFSLSAGQKHANILIDNVTEKVLVYLYELREAEKQGVYDVATVMRQSKLTFQSMNED
DLFWISHGVEIMKNGSFGPAEAFNGNRSEFIDPKDTSGRQFHLARETKQLKREVKDETEI
DSDEEIIEEEPTAADDSDPGAEPMVDDAGASVPALDLSLRRTPRRAAEIAAVKVRQAYER
YKKVRRGVYIDREAPETEEDMVFPTVRNPSPTASPAKKRKVDFGAHFKQLRLLGEIGKEM
SASMGDEAVDGDADDHMEDKNVNMEAGEGDGDEDEETHSVDGEEGGESESGSESGSESES
ESESESGSGSGSEESASGSRQASLSEHSNPLNAEADRMLVPESPPFEDAERIIVAEQSSP
LFERAGPVVAEPGSPRSVEPVPVVVPSATPSSSTFVKDEPFSPPAMLKLEPTSPKAHESS
PDVLAAYSEDFSYLEITDDCPVQKMVDEDVRNHPDAEYSVKPIRFRGTQYPDGKLAYSSD
SESDYDSMDGGYSDIDFGVERAERKKQRREQVEYTHADFQLSENDEEWTPLQPGDLEKVY
NILKWGCEDHS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG