YALI0D19096g

Overview

Description similar to uniprot|P38163 Saccharomyces cerevisiae YBL106C (ohnolog of YPR032W) SRO77 polarized exocytosis by regulating SNARE function
Locus type CDS
Locus tag YALI0D19096g

Location

Species Yarrowia lipolytica Positions 2412758..2416251
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 3494 (nuc.)
Previous locus YALI0D19074g Next locus YALI0D19118g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D19096g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D19096gYALI0D19096g_mRNA-001YALI0D19096g_CDS-001

Nucleotide sequence

 

>YALI0D19096g
ATGTCAGCACTCATTGGCAAACTTCGAAGTATCGGCAACCGAGATCTTTCTGGAGCTCTC
AATGAACGGGCCTTCGATTTCGACGATGTGAGTATTGCCGAGGAGACGGGGAGAGTAGGG
TTGTGGGATCAGCAATGGCGATATAGGTTGTGCTACTCGAGTGGTGTGGCAATGGGGTGG
TAGCAATATTGAAAGTACGACCGTTTGCAAATCTGTATCTTCTCCGGTGCTGTGGTAAGG
AGGTTGGATTCAAGAAGTGAAATGTTGAGGGTGGTGGGAGGCCGATGGAGGAGATCTAGC
TTGGTTTGTATGACCAATACACCAGGTCTGCGAGCGTTTCTTGTATGGTCCGACCGAGCG
ACGGGTCTCTGTCTGCACATCTTTGCTATCATTCTTCTCTGGGCCGCCATGCAAACCACT
TGAGTTCCACTACGATACGCCCTTGCTGGGACACTCGGCCGCTCCCAGTCACAATTCATC
ACATACTAACCCAGCTCGCCCGATATGGAATCCAAGGCGCTGTCACCCGTGTGGCTTTCG
ATCAGGTGCAATCTCTTCTCGCTATCGGAACCTCCTCTGGAGCCATCCACATCTTTGGAC
AAGTCAACGTTGAGGTGATCGTTCAGCTCCCCAGCAACCGTTCCTCGGTCGACTATCTTG
CTTTTGTCGCTGGTAAGTACATTGTTGCAGTCGATGGAGCTGGAATTCTCCACATCGTTT
CGCTCGAAAGCCGAACAGCCATCTACAGCAACAACATCTCCGGCAACATCTCATGCATTG
CCACGGATCCCACGTTGGACTGGGTCTTTATCGGCCTAGAATCCGGCCAGATCATCACCT
ACGACGCCGACCGAGGCTGCATGTCGCCGTTCCGAATTGGCAACCTCCAGAAAGCTGTGC
TTCCCGCGGCCCGTCTGTCTCACGTGATTTCTATCGAGCTCAGTCCACGTGAGTATTCAG
TGCTGCTTGTCGCCTACAAGGAGATTGTCGTGCTATTTTCTCTGGTTGAGAACAACATCA
TTAAACACTTCAAGTACGAAATTCCCGCGGGAGCTCCTGGAGGAGACACGAACGCAGCCA
CGCAAACGATCAACCGATCACCTCCATGCCTGGGAGCCACATGGCACCCCAACGGACACC
ATGTAGTCAGCTGGCATGTGGATGGCTCCATTGTTTTTTGGGATGCCACCGAGGGAAATC
TTCTGCAGGCTCGAACAGTGACAGATTCCAACGTCAACGAGCCCAAGAGATCAAAGACTC
CTCCTGGAGGCCGGAGACTTCCTATCACAGGCCTGGCTTGGATCTGCGAGAAGAATCCTG
AAAACACATCGATTCTCGTGGCTGGTGGTGACATCGACAACGGTCCCATTCGAGGTCTGA
CGTATATGGACTTTGGACCTACTCCCACGGTTGCTGTAACGTCATACGCAGCCATGGGAA
CCCATTACGGCACCCCTAAACGTACCCGGATGTTCCCTATCACAGAGGGAGCCGATGTCA
CGGACTTCTTCCCTCTTGGAGCAGCTTCTCCTTTCTACAACCGGTTTCACGATCCTGGTG
TGGTGGTTGTGCTGCTCAACATTGGAGAAATCTATTCAATCAAGCTCCCGGAAGGCGTCC
CCATTCACACCGCATCGGTTATGCCTCCTTCTATTGGATGGGTGCACCCCCACACTACCA
CTCTCAACCTCGCTGCTGTACCTCGAAACCAGTGGGTGGGCATGATGGCATCCGTCAAAG
GCCACCAGCCCTATTTGGTGGGTGGAGCCCCTGCCCAGCGTCATTTGCGACGTTTTCAGA
CCAGAAACGCACTGTCTACGGGCCACATGAACGGCTTCGTAAGAATTTGGGACGCTTCGC
GGGGTGAACTCCAGGAGAGTAAAGTCCTTGAAGTCGATACCAAGGACGCTCTCAAGTTAC
AGGAAGGAGTGCCGGTGTCTAAAGTGAGTTTTGCAGGCCAAAACGCCGAGCTTGCGGTTG
CCGTATCCACTGGGCATGTGCTTCTGTACAAGTTTGACGTGAATAAGAACCCCAAGCCTG
GTCTGGATCGAATGAAGGACCTGAACCTCTCCGAGAGCAAGGAGAAGGTTATTGATATTC
GGCACCGATTCACTCCCGGTCTGAAGGAAGGCTTCATGCCCATCTCGCTTGTGAACATGA
ACTACGGCAACATCACTGCTCTGGACCACTCCAACGTTGGTTTTGTTGCAATCGGATACG
AGAATGGCCGTGTGGTTATTGTCGACCGACGAGGACCTGCCATTATCTATGATGAGCCAT
GCTCTCAAAATAGTGGTGGAGGAGTTTTCCGCTCTCGTGGATCCGGTGTAGGATCTGCCC
ACGTGACAAGGTTTGAGTTCTCCATTTGTTGTATCGACGACGATGAGTTTTCATCCATTG
TGCTGTTTGCTGGAACTTCCAACGGAGAGCTCATCACCTACCGGTTTGTGCCTAACGGCC
GAGGAGGCTACAAAGTCGAGTATGTGAACCGTCTGCGAATCTGCGACGACCGAATCCTTG
CTATTAACGCTATTGATGCTGAGCGGGGTTCTGCAGCTCTGGCTTTCCCTCACATTATGG
CCAAGCTGGGCCAGGATGTGCTCATTCCAGGTACTGTGGTTGTGACTAGTGTCCATGACG
TGCGTGTGATCCGTCCAAGTGCTTCCAAGATGACCCACAAGAAGTTCCCTCAGTACTCGA
TCCTCGGAGGATCCATCTGTTTCCTGCGAGAAGGTGACTCCATGGCGTTGGTGTGTATCA
CCGACACTTCCGAGCTGGTCTGCCTTGCTCTGCCCTCCTTGCGAGAGATGTCTGTGAAGA
AACTGCCGTACCGAATTGATCCCCGAACTGGTGTAAACTCCGTCTTCTCTCTGACTGGAG
ACATCATCATCCAGATTGATAGACACGAAGCTGGCCTGATTTCAGTGTTTGGCAAGGGTG
TAAAATTTGAGGATATCCCTGGAGATCTGCTCTACGATCCTCTCAAGGTATGCCCTCCGC
GCCCTGTGGTCTCAACTCTTCAGTGGGTGAGGGGATCCGTTTACACCACAAAGGAGGACA
TCGACAAGCTGATTGGAGGTGCCCGACGACCCAAGTCACAGGCTATGATCCAAGAGGAAG
AGAGAGCTCGAGAAGAGCAGCGTCGACAGCGTGATCTGGAGCGACGAAAACACCAGGAGC
GAGTGGCCCATCGACAAAGGTATGATGAGTACTACACTGGAAACGGCGACGATGACGAGT
ACTATGATGAAGACGGTGTTCGGCGAAGAAACGCAGGCGGCATACAGGGTGCTTGGGATA
ACCTAGAGGAGACGGGCCATTCGTACTTGAACTCTGTAAACGAGAGTATCAAGGAGGCTC
AGAACGATATGTTTAAGGGTATCTTGAAGAGTAAGTTTGGATTCTAGTCGGCAAGCTGGC
CAGATCAGACCTGTGTGTGAACTTCTCTTTTTTTTTAACGATACCATAAATAAATGTTTG
ATCATTCAACATGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D19096g_CDS-001

Protein length: 1000 aa.
Product: Protein with roles in exocytosis and cation homeostasis, putative

>YALI0D19096g_CDS-001 MSALIGKLRSIGNRDLSGALNERAFDFDDLARYGIQGAVTRVAFDQVQSLLAIGTSSGAI
HIFGQVNVEVIVQLPSNRSSVDYLAFVAGKYIVAVDGAGILHIVSLESRTAIYSNNISGN
ISCIATDPTLDWVFIGLESGQIITYDADRGCMSPFRIGNLQKAVLPAARLSHVISIELSP
REYSVLLVAYKEIVVLFSLVENNIIKHFKYEIPAGAPGGDTNAATQTINRSPPCLGATWH
PNGHHVVSWHVDGSIVFWDATEGNLLQARTVTDSNVNEPKRSKTPPGGRRLPITGLAWIC
EKNPENTSILVAGGDIDNGPIRGLTYMDFGPTPTVAVTSYAAMGTHYGTPKRTRMFPITE
GADVTDFFPLGAASPFYNRFHDPGVVVVLLNIGEIYSIKLPEGVPIHTASVMPPSIGWVH
PHTTTLNLAAVPRNQWVGMMASVKGHQPYLVGGAPAQRHLRRFQTRNALSTGHMNGFVRI
WDASRGELQESKVLEVDTKDALKLQEGVPVSKVSFAGQNAELAVAVSTGHVLLYKFDVNK
NPKPGLDRMKDLNLSESKEKVIDIRHRFTPGLKEGFMPISLVNMNYGNITALDHSNVGFV
AIGYENGRVVIVDRRGPAIIYDEPCSQNSGGGVFRSRGSGVGSAHVTRFEFSICCIDDDE
FSSIVLFAGTSNGELITYRFVPNGRGGYKVEYVNRLRICDDRILAINAIDAERGSAALAF
PHIMAKLGQDVLIPGTVVVTSVHDVRVIRPSASKMTHKKFPQYSILGGSICFLREGDSMA
LVCITDTSELVCLALPSLREMSVKKLPYRIDPRTGVNSVFSLTGDIIIQIDRHEAGLISV
FGKGVKFEDIPGDLLYDPLKVCPPRPVVSTLQWVRGSVYTTKEDIDKLIGGARRPKSQAM
IQEEERAREEQRRQRDLERRKHQERVAHRQRYDEYYTGNGDDDEYYDEDGVRRRNAGGIQ
GAWDNLEETGHSYLNSVNESIKEAQNDMFKGILKSKFGF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG