YALI0D18920g

Overview

Description weakly similar to uniprot|P28272 Saccharomyces cerevisiae YKL216w URA1 dihydroorotate dehydrogenase
Locus type CDS
Locus tag YALI0D18920g

Location

Species Yarrowia lipolytica Positions 2394418..2396030
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1613 (nuc.)
Previous locus YALI0D18898g Next locus YALI0D18942g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D18920g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D18920gYALI0D18920g_mRNA-001YALI0D18920g_CDS-001

Nucleotide sequence

 

>YALI0D18920g
ATGATGTCAGCCCGAACAGCACGAGTTCTGATGCAATCGGGGCGATCTGCGCGTCTGGCG
GCTCCCCTGCGTCCGCTGCACCGATCTCTGCACTCAAATCCCAAATACGAGTACACCAAG
GCCTCGTTCACGGGCTTTCTCAAGTGGTCGGCTATTTTCGCCGGAGCCACGGCCTTTGCT
TTCTACACAGTCGACAGCAGATCCGCAATCCACCAGTACATTGCGCTGCCCATTCTACGT
CTGTGCACCGACGCCGAGACCTCCCACCGCCTGGGAATCGAAATTCTGGCCAACGGCATG
TCTCCCAAGCAGCGTCAGGAGGATAACGAGATCGACCCCAACCACCTTCTCGAGGTGACC
ATTTTCGCCAACTCCAAGCGACCCCTCACCCTGCGAACCCCCATTGGAGTTGCTGCCGGT
CTTGACAAGCACGGTCAGGCCATTGACGGGCTTTTTGGCCTGGGCTTCGCCTATGTGGAG
GTTGGTTCTGTGACCCCTGAGCCCCAGGACGGAAACCCCAAGCCCCGATTCTTCCGACTC
CCCAAGGATGATGCCGTCATCAACCGATACGGCTTCAACTCCGAGGGCCATTTTGCTGTC
ATGGGCCGTCTCAAGCAACGTCTTTTGCACGCTCTGGGCCACGAGCAGCCCCAGCACGAG
GACACCAGACACTCTCTGGACAAAAACAAGGTGCTGGCTGTCAACCTTGGCAAGAACAAG
ACCGGTGACGAGGTGTCCGACTACACCCAGGGCGTCACCCGGTTTGCCAACCTGTCCGAT
GCTCTTGTCGTCAACGTGTCTTCCCCCAACACCCCCGGCCTGCGAGCTCTGCAGGGAGAG
GAGAGACTGGCAAAGCTGCTGACCGCCGTGGTTGCCGAGCGAAACAAGGTCCAGTTCGCC
AACACTTACACGCCCATTCTGGTGAAGATTGCTCCTGATCTGAGCGAGTCTGAGATTGTG
TCGATTGCTGCTGCAGCCAAGCAGTCCAAGATTGACGGAATCATCGTTTCTAACACCACT
ATTCAGCGACCCGAGCATCTGCGATCACAGCCTTATCTTTCTGCCGAGACTGGAGGTCTT
TCTGGCGCTCCTCTCAAGCCCATTGCTCTCAAGGCCATCAAAACTCTACGAAAGAACATT
GGAGACGAGATCACCATTGTGGGCTGTGGAGGTATCAGTAACGGAAAGGACGCCATTGAG
TTTGCTCGAGCCGGAGCAACCTTTGTGCAGGTGTACACCGCTCTCGCTTACCAGGGTCCC
GGACTCCCCGTCCACATGAAGCAGGAGATTGTCAAGGAGCTGAACGGAAAGAAGTGGGTG
GATATTATTGGCGCTGATGTTGATGTGAAGAAGGAGTAGGTCACCGAAGGACAGCATCCG
GTAGATTCACGGTAACAGGTGTTCCTAAACATCATCGGGACACCGTCCAGTAGACGGACA
ACCATCCACTTAGGTCATGGCAGAATAGATTAACAGATATGAAATGATGAGTTGTGGATT
GCAGTTAGGGAGGCATGGATAAGATGTTTGGGGGTGGTGGGGAAGTGTCCATGCTATCTA
TTATGGGTTGTAGATGCCGTATCAGGAGGTGAATACAAGTAGGTGGTCAATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D18920g_CDS-001

Protein length: 453 aa.
Product: Conserved hypothetical protein

>YALI0D18920g_CDS-001 MMSARTARVLMQSGRSARLAAPLRPLHRSLHSNPKYEYTKASFTGFLKWSAIFAGATAFA
FYTVDSRSAIHQYIALPILRLCTDAETSHRLGIEILANGMSPKQRQEDNEIDPNHLLEVT
IFANSKRPLTLRTPIGVAAGLDKHGQAIDGLFGLGFAYVEVGSVTPEPQDGNPKPRFFRL
PKDDAVINRYGFNSEGHFAVMGRLKQRLLHALGHEQPQHEDTRHSLDKNKVLAVNLGKNK
TGDEVSDYTQGVTRFANLSDALVVNVSSPNTPGLRALQGEERLAKLLTAVVAERNKVQFA
NTYTPILVKIAPDLSESEIVSIAAAAKQSKIDGIIVSNTTIQRPEHLRSQPYLSAETGGL
SGAPLKPIALKAIKTLRKNIGDEITIVGCGGISNGKDAIEFARAGATFVQVYTALAYQGP
GLPVHMKQEIVKELNGKKWVDIIGADVDVKKE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG