YALI0D18898g

Overview

Description some similarities with uniprot|P36166 Saccharomyces cerevisiae YKR090w related to chicken Lim protein kinase and Islet proteins
Locus type CDS
Locus tag YALI0D18898g

Location

Species Yarrowia lipolytica Positions 2386354..2388409
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2056 (nuc.)
Previous locus YALI0D18876g Next locus YALI0D18920g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D18898g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D18898gYALI0D18898g_mRNA-001YALI0D18898g_CDS-001

Nucleotide sequence

 

>YALI0D18898g
ATGAAACCTCTCAACGTGAACACGGACTTCCGAGACTTCCAGTCCCGCGGATACGCCTCT
TCTCAGTATGGAGGCTCTTCAGCCTCGTCCATCCACTCTTCTCTCACGTCGCCCTTGTCG
GCTTCTTCGCGCTCAAACTTCGACAACGCCTTCCCTAAGTTTGTGCCCGGCGTCCAGTAC
AAGAGCGTCTACGAGCGGGCTGGATTCGAGGTGAACCGGGAGGGCCAGCAACGGGCTGGA
TACGCCTCTTCCATCAAGAGCGGCCGATCCCAGCGATCCCAGCGCTCGTACAAAAACGGA
CCCTATTCGCATATGAACTCGTCCGAGGTGTCTATTCTGGGTCTGTCAGAGATGGAGAAA
CGGAACCAGCAGCAGCAGCAGCAGCAGCACCCCCACCACCACCACCACCAACAACAGCAT
CAGCATCTCGTCGGATTGGGAATCGACACAACTAAGCCCGAGTCGCCAATCTCGCCAGCA
GCGCCCGTGGCACCTCCCATGTCGCTGAGACGAAAACAGAGCATGGCGTCCGGCAAGCCC
AAGGTTGATCATTCGGAGCCCGTCCCCGATATCGACATCCACGACAGCGCAAGTTACACG
GCGCCCAGATCAAACAGCAACGCCTCGGACTATCTCAAAAACAACGGCTTCAAGCTGGAC
AATTCGACAATCAGCCACACCAGAGGCCTCAGTATCGAAACCAAGGGCCTCAACGTAGAG
CCCAAAACGAGCTTCGGCAATATGCCAGGTGCCAAGTCGTTCTCCGACAAGACATTTGGC
GTGTCGAATCTCGCGACGCCGCCCAGCTCAGCGGGCGAGCCGTCATCGGACCACCCCCAT
CATCTCCAGATCCCCGGTTACCTGCCTCCCAACAGCCCGTTGCCCGACCGACCGCTGTCT
TCGTGCTCGTCCATCTACTCAGACTCGGACGACCCTGTGACCCGGAACTCGGTCATGCCC
AACCCTCCCAGCAGACAGCTGGAGTCGCAGCCCCAGTACAGCCATTCACCGCTCGCACGG
GTGGAGTCGAGTGACAATGACATGTCACGTGCCAACGACGTGCATATGTCACACGCCAGC
TCGGACCAGGGCTACACCTATTCACAGACACATGCCAGCTCGTCTTCTCGGTCTTCCAAG
GACTCCATAGACTCGTCGCTGTCTAACATGAGCATCAACACTAGCGCTACCACGCCCATG
GACTCGTGTCATTCGTCCTCCATGTCGCTGATGCCTGTGCAGGAGTACCAGCCTGACTCG
ACCGACACGTCGTTCACATTCGAGAGCAAAACGTCTTCCTCTGAGAATGGCGGCAAGAAA
AAGAAGCGAAAGACGCCCTGCCGAGGCTGCAACCAAATGATTGTGGGCAAAGCCGTTTCT
GCCAAGGATTCGCTTTCTGGGCGATGGCACAGAGAATGCTTCAAGTGCCACGGATGCGAC
GACGACTTCCCCAGCACTGAGGGACTCGAGTTCTACATTCATGACGACTGGCCATACTGC
CAACAGTGCTACCACCACACCAACAACTCCATTTGTTCGGGATGTGGTCAGGGCATTGAG
GGTGAGTGTCTGGAGACAACTAGTGGTGACGCTGGATTGTTGCTGAGATATCACACCTCG
TGTCTTGTGTGTGCCACTTGTGGCGACTCGCTTTGTCACGACGAGTACTACACGGTTGAC
GGAGTGCCGTTGTGTGACAAGCATGTTGGGGCCAGTCAGGTTGTAGAGAAGCGACAGACT
CGGATGATGTTTATGTAATTGCGACAATGAACCAAGTCGTGATCCAACCGTGTGATGGAA
CTGACGCTCCACGGACATGTGCGCGCAGGACTTTGAGATATCCCGCCTTTGGCGTTTTGC
CAGAACTGGTCTCCATGACCAGGAAGGCATTGACTGCGGTATTCGATTTGAGTATCAGCA
GTGTACGAGGCACCGGACATCTGGTGGCCGCGGAAAAGCATTTATTTATAGCATTGCTCG
GCTTTGCGACAGCAATAGTAATCGGCTGAATGGCGTGAGCCCCGCCGGATCATACAGTAA
TTGATAATCTATTCAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D18898g_CDS-001

Protein length: 586 aa.
Product: Conserved hypothetical protein

>YALI0D18898g_CDS-001 MKPLNVNTDFRDFQSRGYASSQYGGSSASSIHSSLTSPLSASSRSNFDNAFPKFVPGVQY
KSVYERAGFEVNREGQQRAGYASSIKSGRSQRSQRSYKNGPYSHMNSSEVSILGLSEMEK
RNQQQQQQQHPHHHHHQQQHQHLVGLGIDTTKPESPISPAAPVAPPMSLRRKQSMASGKP
KVDHSEPVPDIDIHDSASYTAPRSNSNASDYLKNNGFKLDNSTISHTRGLSIETKGLNVE
PKTSFGNMPGAKSFSDKTFGVSNLATPPSSAGEPSSDHPHHLQIPGYLPPNSPLPDRPLS
SCSSIYSDSDDPVTRNSVMPNPPSRQLESQPQYSHSPLARVESSDNDMSRANDVHMSHAS
SDQGYTYSQTHASSSSRSSKDSIDSSLSNMSINTSATTPMDSCHSSSMSLMPVQEYQPDS
TDTSFTFESKTSSSENGGKKKKRKTPCRGCNQMIVGKAVSAKDSLSGRWHRECFKCHGCD
DDFPSTEGLEFYIHDDWPYCQQCYHHTNNSICSGCGQGIEGECLETTSGDAGLLLRYHTS
CLVCATCGDSLCHDEYYTVDGVPLCDKHVGASQVVEKRQTRMMFM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG