YALI0D18249g

Overview

Description some similarities with uniprot|Q8WZS2 Neurospora crassa Dynactin (150 kDa dynein-associated polypeptide) ro- 3
Locus type CDS
Locus tag YALI0D18249g

Location

Species Yarrowia lipolytica Positions 2280103..2282275
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2173 (nuc.)
Previous locus YALI0D18216g Next locus YALI0D18271g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D18249g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D18249gYALI0D18249g_mRNA-001YALI0D18249g_CDS-001

Nucleotide sequence

 

>YALI0D18249g
ATGACCGAAATCGATATCGACAGCGAAGAGTCTTTCATGTCCGACGGTGATTATTCCGGC
TCCACCGCCACCAGTGTTGAGGAGGACAAGGGCGTGGCGATTGGCAGCGACAACAAGCGC
CACACGGTGGAGAATGGCGTGGGCACACAAACAGCAACACGCCCGACGTCGTCCATAGCG
TCGCGACGAAGCTCGGCGTCCATCAACGGAGTTCCGCTTCTGGGCCAGACCAAGCAGGAT
GTGGCTTCCGAGGTGGCTCGACGGATCAGAGAAATCTCCCAGAGCATGGACAATGGACCC
AAGTATGTGGCCAAGCCTGAGCCGCGCAAACTGTCGCTCAAGAAGCGATGGCGAGACTCG
TTTTACGGAGGGTCTTCGCACGAGAGCTCCCCCACCGCTCCCACACACACGCCCGGGTCT
CGGACATCCATAATCATCTCGACTCCGACGCTCAAACAGGGCTCCAAGAGCTCGGCCCTC
GAGATTTCTAAACCCATCTCCCGAGCCAACAGTGTCACGGCGCCCGTGAAACGACAGGCC
ACCAACCCCTCCCCACAGAGAAACTCGTTCCATGGAGACTGCCCTCCTCCTTCCTCTGCA
CAGAGCGACCATGGAGGACTGGTACGTAACCCCAGTGTCAAGTACGGCGGCAGACGAATC
AGTGGACCCATTGAAGTCAACGGAACCCCCGACTTTCAAACAGTTCCCCTCTCCCAGTAC
AACCACAACAATCCCAGCGTCACATCTCTGCAGCTCTCCTCTTGTCATACCCCTGCTACT
ACATCGGATGGTGTTGTGGAAACCATCGAAATGACGTCCCAGGCGTCCCACTTCCACTCA
ATGCGTCGCAAATCCGACGGAGCGCTTCTCAACACCATCACCAACCATGCCAACGGACGC
TCCAACTCTCTCAACGCCACATCAGCCAATGTGACCCTGGAAAACCCGCCACCGGTCAGC
TCCATGCTGCTTCCTGCTGGCGCAGGGAGCCTCAGTCGCAAACCCAGCTCGCTGTCGGGC
TCCGCTGTTTCTGCCAACCACAAACTGTCTGTGCAGAAATCGTCGCCTCAACTCAAACAC
AAACACTCGCCCAACATGAGTATAGACGAGACGACAATGGAGCCTGGACTGGCGCTTGAG
CTCGAGCGTCGCAAGGTCATGGAGCTCAAGCGGATCGCCACTAACCAGAACGTCGAGAAG
CTGCAGCTGGTCAAACAGGCCGAACGAGACCGGCTGCTGTTTGAAGAGACAGAGAAGCTG
TTGGAGGGGCAGCGTAATGAGGTTTCCCGGCTGGTCCAGGAACTGGAGCGTGTGGAAAAA
CTGCGCAAGGAGGACAAGGAGGGCCATCTCGAGGTCATTGACTCGCTGCAGAGAGCAGTC
GGGAGTAACAAGGTGCAGGCCATGGGTGTTACGCGGAAGGTAGTTAAGGAAGGTGATAAT
GAGAGTGTCGAGGCGGCTGCGGATGTTCAAGATGAGGACCGGGATGTTGTCATGGAAACC
GAGACGGTCACTGCACCCACCAAGGACGAGGTTGCAGAGTCAATTGCCATGGCGACCGCG
GCCATGGAGCGAACCACCGCGGCCGAGGCTGCCATTGTGCATCTTGAGTCCGAAATCAAC
CACTTGCGACTCCACCGAGACTCGCTCAGAGACGCCCTTACTTCTCTGCGAAAGTCCTCC
GACATTGAAATCAAGTCGTACCGAGACCAGTGCATGCGGCTGGAGAAGCGTCTGGCTGAG
CTGGAGGGCGACAAGAAGACTGCTGTGGCTTCTCAGAGCAAGAATGCCTCTGCCCCCAAC
TCTCTGGGTCTAAAGCGGCTGTCATCCAGTTCTGCTCTTGGCAAATCTTCGTTGTTTATT
CGAAACGAGCTGTACCAAGAGCTATTTGATCGAGACGCCGATGTTGTGCGAAAGATCCAC
GAGAACATTGAGGAGGAGGAGGAGGGACGAATGAGCCAGGTTCCCGAGAACGATTCAGCC
CATGAACGGCGAGGCGTTCCGCGGTTTATCACCGTGGTTGAGGAGGAGTAGGAAGAATCG
CCAACATTAAGTGTTCTGTCGACTATGGTCGTGTCTCGATAATACAACACAGTCCACTTT
TGCGTCGGCAGTCGAGCACTCCCCCCAACCAAGGACAGAGTATTTATAGCTAATAACAAT
ATGTATACTAATT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D18249g_CDS-001

Protein length: 677 aa.
Product: Conserved hypothetical protein

>YALI0D18249g_CDS-001 MTEIDIDSEESFMSDGDYSGSTATSVEEDKGVAIGSDNKRHTVENGVGTQTATRPTSSIA
SRRSSASINGVPLLGQTKQDVASEVARRIREISQSMDNGPKYVAKPEPRKLSLKKRWRDS
FYGGSSHESSPTAPTHTPGSRTSIIISTPTLKQGSKSSALEISKPISRANSVTAPVKRQA
TNPSPQRNSFHGDCPPPSSAQSDHGGLVRNPSVKYGGRRISGPIEVNGTPDFQTVPLSQY
NHNNPSVTSLQLSSCHTPATTSDGVVETIEMTSQASHFHSMRRKSDGALLNTITNHANGR
SNSLNATSANVTLENPPPVSSMLLPAGAGSLSRKPSSLSGSAVSANHKLSVQKSSPQLKH
KHSPNMSIDETTMEPGLALELERRKVMELKRIATNQNVEKLQLVKQAERDRLLFEETEKL
LEGQRNEVSRLVQELERVEKLRKEDKEGHLEVIDSLQRAVGSNKVQAMGVTRKVVKEGDN
ESVEAAADVQDEDRDVVMETETVTAPTKDEVAESIAMATAAMERTTAAEAAIVHLESEIN
HLRLHRDSLRDALTSLRKSSDIEIKSYRDQCMRLEKRLAELEGDKKTAVASQSKNASAPN
SLGLKRLSSSSALGKSSLFIRNELYQELFDRDADVVRKIHENIEEEEEGRMSQVPENDSA
HERRGVPRFITVVEEE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG